PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0148s0016.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family ERF
Protein Properties Length: 662aa    MW: 70863.3 Da    PI: 4.5586
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0148s0016.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.42.3e-20260309255
                   AP2   2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                           +++GVr+++ +g+W+AeIrd +     +  r +lg+++taeeAa+a+++a+++++g
  Sphfalx0148s0016.1.p 260 KFRGVRQRP-WGKWAAEIRDpF-----KgVRLWLGTYDTAEEAAQAYDKAARQIRG 309
                           89*******.**********55.....45************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.52E-33260317No hitNo description
SuperFamilySSF541713.14E-22260317IPR016177DNA-binding domain
PROSITE profilePS5103223.881260317IPR001471AP2/ERF domain
SMARTSM003808.2E-37260323IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.3E-31260317IPR001471AP2/ERF domain
PfamPF008472.2E-13260309IPR001471AP2/ERF domain
PRINTSPR003672.8E-10261272IPR001471AP2/ERF domain
PRINTSPR003672.8E-10283299IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0042991Biological Processtranscription factor import into nucleus
GO:0048364Biological Processroot development
GO:0048825Biological Processcotyledon development
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042802Molecular Functionidentical protein binding
Sequence ? help Back to Top
Protein Sequence    Length: 662 aa     Download sequence    Send to blast
MPGPKTLPKF PPAAMAAAPA VANKVKNKLC STKVLKRDLV FSRESELEDA ESWDHGKLQI  60
CPKRVRVICT DPDATDSSSD EEGNFRRSEV LIRNNSHRKR RQYVQQIDIR LAHQQQQGAA  120
FFSSCSASDA DSEEEATAAA VVDEDVPSYH SIFTAQAMMM RCSHNYASPI GGTARSSVVP  180
LLQQQQQQNK VFKSCGKAKK KASKIPKMPV LKKLQLDAAA TTSASSKPSA ASAQATAKSL  240
AAAAKTSSRG GGGEDGKINK FRGVRQRPWG KWAAEIRDPF KGVRLWLGTY DTAEEAAQAY  300
DKAARQIRGP QAHTNFPGFE ELELPTAANP DSSSGLKKRA AASPENPNGC TGVSNKKDVA  360
AAGKCVAAVA FNSEKKPLCP AVAEIEFLTD RVSSSEEEEK SCHTAVFEPE VNDDGGSPSA  420
SERSEGSALT RSMEELGEDD DDVHHPNLRE VVGQGQSLPC YDGFPHPDEE CANFLMCSPS  480
SALDGCSTSF SELSSGSIAD NSDAFSCDPF TTSGRSMGVE EESHGLAEST NGNTSHTPNI  540
VDQTSLGVNL AVVQKDNAQE KESEDKDTSL DSELVGKEAR GGEDKDAELQ NLADLSQVFF  600
SDDEFLFDIP DCDGDDGGLI MMEFEAGFDL LCDGEKIMDL GLDGGNEAMN WFSAPDNIAI  660
A*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A2e-20261317360ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
5wx9_A9e-20249317672Ethylene-responsive transcription factor ERF096
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00027PBMTransfer from AT4G23750Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23750.28e-20cytokinin response factor 2