PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0149s0049.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family ERF
Protein Properties Length: 495aa    MW: 52151.2 Da    PI: 7.9893
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0149s0049.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.51.9e-19303353256
                   AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                            y+GVr ++ +grW AeIrd       + r++lg+f+tae+Aa+a++aa+++l+g+
  Sphfalx0149s0049.1.p 303 VYRGVRKRP-WGRWSAEIRDrI----GKCRHWLGTFDTAEDAARAYDAAARNLRGA 353
                           69*******.**********33....24*************************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.103.8E-29302359IPR001471AP2/ERF domain
PROSITE profilePS5103221.931303360IPR001471AP2/ERF domain
SuperFamilySSF541716.54E-21303360IPR016177DNA-binding domain
PfamPF008472.9E-13303352IPR001471AP2/ERF domain
SMARTSM003804.3E-31303366IPR001471AP2/ERF domain
CDDcd000185.84E-17304359No hitNo description
PRINTSPR003675.4E-10304315IPR001471AP2/ERF domain
PRINTSPR003675.4E-10326342IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 495 aa     Download sequence    Send to blast
MALHEMLLQA GCCSSMQVPK RKSRDSLSEA SSAKREKLQP AAGLQLEQLP LHLLGLCMRC  60
SAPATVHPFC VACLCHLQNH SSRGFQACPP LQHEYRSPHQ DLDSSSWSNF NSRPRFFAHG  120
SSCSYQEPLQ LADVVQKPPP PPPAAAAPEA AASEARNVQD LEGIAAVVGS RALFGRRSSS  180
SSTSTASELL ISSSSWQPSC SPASVPPAVQ MMMTAFNSSS SFHDMASDPS TSETALNCSQ  240
ALRGDPSSTP MTSCCAVESS GLILSSQGNK PTASSGNNLQ HPAAASVLNV RTASSSTAAA  300
ARVYRGVRKR PWGRWSAEIR DRIGKCRHWL GTFDTAEDAA RAYDAAARNL RGAKARTNFV  360
IPSSYSCCSS SSSSPSSVHG AAAAESPCKI SMVHGRRNSI KAANVVPIAA ASSDHDPSSF  420
PAAAVDHMQF DEFNNVPQTA AGAGHDLQQQ LPPAIRALEL DLKLGFCSPR SSSSSLEESA  480
QESTSASATT YPFT*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-173043661576Ethylene-responsive transcription factor ERF096
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80580.12e-20ERF family protein