PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0151s0005.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family ERF
Protein Properties Length: 238aa    MW: 27065.3 Da    PI: 4.8839
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0151s0005.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2552.1e-171766255
                   AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                          +y+G+r ++ +g+Wv+eIrdp++   r+r++lg+f +aeeAa a++aa  +l+g
  Sphfalx0151s0005.1.p 17 QYRGIRMRR-WGKWVSEIRDPVT---RTRIWLGSFRSAEEAAHAYDAAIVCLRG 66
                          69****998.**********765...5************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.104.9E-291675IPR001471AP2/ERF domain
SuperFamilySSF541711.11E-191775IPR016177DNA-binding domain
PROSITE profilePS5103221.5091774IPR001471AP2/ERF domain
PfamPF008478.7E-91766IPR001471AP2/ERF domain
CDDcd000183.60E-281776No hitNo description
SMARTSM003804.5E-321780IPR001471AP2/ERF domain
PRINTSPR003671.8E-91829IPR001471AP2/ERF domain
PRINTSPR003671.8E-94056IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    Send to blast
MEHRGSGSGV LSQQQRQYRG IRMRRWGKWV SEIRDPVTRT RIWLGSFRSA EEAAHAYDAA  60
IVCLRGPNSQ PNFPHHTPTI PSGTPGYYSR REIQAAAAAS AAAAAGRPFN YNEFMSPNAS  120
DMSDESGESE LLEDITYTEE EEESGVYYQF RESGISYPSP HYHSPLPPPP PSCSHSSNHI  180
FNFNNNWSCN VDDHHFDDPY EREWVHNLIF PSTTPNDDYS EDHENSFVEP CLWSYER*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A5e-14175173Ethylene-responsive transcription factor ERF096
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11524RQYRGIRMRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024359814.13e-45ethylene-responsive transcription factor ERF017-like
TrEMBLA0A2K1L4G96e-44A0A2K1L4G9_PHYPA; Uncharacterized protein
STRINGPP1S1_34V6.11e-44(Physcomitrella patens)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.12e-19ERF family protein