PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0152s0056.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family ERF
Protein Properties Length: 214aa    MW: 24117.1 Da    PI: 7.7884
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0152s0056.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2569.8e-18653253
                   AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkl 53
                          +y+GVr+++ +g+Wv+eIr+p        +r++lg+f tae+Aa a+++a++ +
  Sphfalx0152s0056.1.p  6 RYRGVRQRH-WGSWVSEIRHP-----LlkTRVWLGTFETAEDAAHAYDEAARLM 53
                          69******9.**********8.....334*********************9865 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.01E-31563No hitNo description
PfamPF008476.4E-11654IPR001471AP2/ERF domain
SMARTSM003803.6E-38669IPR001471AP2/ERF domain
SuperFamilySSF541714.38E-20664IPR016177DNA-binding domain
PROSITE profilePS5103220.771663IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.108.5E-34663IPR001471AP2/ERF domain
PRINTSPR003671.1E-10718IPR001471AP2/ERF domain
PRINTSPR003671.1E-102945IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009414Biological Processresponse to water deprivation
GO:0010143Biological Processcutin biosynthetic process
GO:0010166Biological Processwax metabolic process
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    Send to blast
MGRTQRYRGV RQRHWGSWVS EIRHPLLKTR VWLGTFETAE DAAHAYDEAA RLMCGIRART  60
NFPLDPNAPQ NPKTQMLSAT LTAKLQRWYL ASQDHNLVQQ QQVKKKDNAR NMEQSLTCLC  120
LDTEQSNLGI WQKKTGRQAE ANWLRKVEFG SCNSSSPFIK PEPSTDSCMS EEDKFASEMI  180
EELLGHNSGH LELMSPSMSD SSCSSTSCLT AFS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A3e-18268168ATERF1
3gcc_A3e-18268168ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024386105.11e-101ethylene-responsive transcription factor ERF003-like
TrEMBLA9S9841e-100A9S984_PHYPA; Predicted protein
STRINGPP1S79_25V6.14e-96(Physcomitrella patens)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15360.13e-39ERF family protein