PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0180s0013.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family ERF
Protein Properties Length: 307aa    MW: 32904 Da    PI: 4.5371
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0180s0013.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.71.4e-1851101155
                   AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                           s y+GVr +  +g+Wv+eIr+p+   kr +++lg+f tae+Aa+a++aa  +l+g
  Sphfalx0180s0013.1.p  51 SPYRGVRMRQ-WGKWVSEIREPN---KRSKIWLGSFPTAEMAARAYDAAVVCLRG 101
                           68*****998.**********93...36*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541713.53E-2151110IPR016177DNA-binding domain
PROSITE profilePS5103222.61652109IPR001471AP2/ERF domain
SMARTSM003802.5E-3652115IPR001471AP2/ERF domain
PRINTSPR003671.5E-95364IPR001471AP2/ERF domain
PfamPF008477.2E-1153101IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.107.3E-3153111IPR001471AP2/ERF domain
CDDcd000187.11E-3153111No hitNo description
PRINTSPR003671.5E-97591IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    Send to blast
MVEKQRTQAA AASRRRAKLL GPVNKELEGV HKHAGNMIAR AAASPKPSSS SPYRGVRMRQ  60
WGKWVSEIRE PNKRSKIWLG SFPTAEMAAR AYDAAVVCLR GPSAPMNFPN SPSLALPKCD  120
SPKDIQAAAA AAAAEPCTPL SMAKPVAVSL GAQLNNIEYG SVPIRVSEAE SQGSIGPTSP  180
AGEEISVLGK AAATAPVKLE NIESYCTGES GPFVQQELAT SVKLDDIGYT EESAPPTHLQ  240
QEEQNSEVDL SIWDSEMIRE LEDMLFEDLP PLTDFEESQV FNPQVSADDS TDPPALWSEP  300
NYASLL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A7e-16481151078Ethylene-responsive transcription factor ERF096
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024383640.19e-50ethylene-responsive transcription factor ERF043-like
STRINGPP1S8_127V6.13e-49(Physcomitrella patens)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44940.12e-28ERF family protein