PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0180s0018.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family ERF
Protein Properties Length: 212aa    MW: 24432 Da    PI: 9.8982
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0180s0018.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP238.33.4e-1298141151
                   AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                           +  +GV++  k+ +W A I++      +k+++lg+ g+ eeAa+++++a+ 
  Sphfalx0180s0018.1.p  98 CVMRGVYF--KNMKWQAAIKVE-----KKQVHLGTVGSQEEAARLYDRAAY 141
                           568***99..47*********6.....6********************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008473.4E-698142IPR001471AP2/ERF domain
SuperFamilySSF541719.15E-899144IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.6E-6101146IPR001471AP2/ERF domain
SMARTSM003801.9E-4101156IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    Send to blast
MVSIRKRRPG GLSPDKHGQP QAYQRLPFLL SARETTLASP EGLKSNEDIP PKQEVHTTCT  60
SLAQPLNQIY VPNLFPKERE LKKRKHQRRK QQGNQEPCVM RGVYFKNMKW QAAIKVEKKQ  120
VHLGTVGSQE EAARLYDRAA YMCGREPNFE LSEEDKLELQ GFQWDEFLEL TRKSILNKKG  180
QRAKREDRDK NRDVPAAMDE LENPSLSMCL L*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17584PKERELKKRK
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024375016.12e-68ethylene-responsive transcription factor-like protein At4g13040
RefseqXP_024375017.12e-68ethylene-responsive transcription factor-like protein At4g13040
RefseqXP_024375018.12e-68ethylene-responsive transcription factor-like protein At4g13040
RefseqXP_024375019.12e-68ethylene-responsive transcription factor-like protein At4g13040
SwissprotQ56XP96e-45ERFL1_ARATH; Ethylene-responsive transcription factor-like protein At4g13040
TrEMBLA0A2K1KKB15e-67A0A2K1KKB1_PHYPA; Uncharacterized protein
STRINGPP1S93_77V6.18e-68(Physcomitrella patens)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.12e-47ERF family protein