PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0200s0001.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family ERF
Protein Properties Length: 165aa    MW: 18072 Da    PI: 9.6575
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0200s0001.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP241.72.9e-1362104348
                   AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaia 48 
                           ++GVr ++  ++Wv eIr  s   ++++++lg++ t++eAa+a++ 
  Sphfalx0200s0001.1.p  62 FRGVRHRPELNKWVTEIRPTS---QKRKIWLGTYETPQEAARAYDV 104
                           8***************99942...35******************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003803.1E-1361124IPR001471AP2/ERF domain
PROSITE profilePS5103215.42261121IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.1E-1962120IPR001471AP2/ERF domain
SuperFamilySSF541711.18E-1362119IPR016177DNA-binding domain
CDDcd000182.79E-1562120No hitNo description
PfamPF008473.3E-962103IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    Send to blast
MRLHASSSPD RSYKSRNIDL NKEPTAWDDN TDDHASSTSC CTGGGGGGGG GGGGGGDSTA  60
PFRGVRHRPE LNKWVTEIRP TSQKRKIWLG TYETPQEAAR AYDVGIYYTR KKIPYNFPDS  120
PHHLQNQPIS PELPWETFAA LVKQRATLAA KRHRVNLQEA TPAQ*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024361002.12e-63ethylene-responsive transcription factor ERF110-like
RefseqXP_024361003.12e-63ethylene-responsive transcription factor ERF110-like
RefseqXP_024361005.12e-63ethylene-responsive transcription factor ERF110-like
RefseqXP_024361006.12e-63ethylene-responsive transcription factor ERF110-like
RefseqXP_024402755.12e-63pathogenesis-related genes transcriptional activator PTI6-like
RefseqXP_024402756.12e-63pathogenesis-related genes transcriptional activator PTI6-like
TrEMBLA0A2K1IP525e-62A0A2K1IP52_PHYPA; Uncharacterized protein
TrEMBLA0A2K1IZM75e-62A0A2K1IZM7_PHYPA; Uncharacterized protein
STRINGPP1S17_332V6.18e-63(Physcomitrella patens)
STRINGPP1S225_102V6.19e-63(Physcomitrella patens)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G46768.17e-15related to AP2 1