PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0228s0027.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family NAC
Protein Properties Length: 489aa    MW: 53749.6 Da    PI: 5.177
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0228s0027.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM105.18.9e-33361791128
                   NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......lelee....vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra. 77 
                           lp G+rF+P+deel+ e+L +kv + +      +   +    +++e  +i++++P++Lp  +k++ + +++F k + +y+tg+rk+r+ 
  Sphfalx0228s0027.1.p  36 LPSGVRFDPSDEELL-EHLLAKVGHGSskehplI---NdfilTLDEEdGICRTHPENLP-GMKKDGTACHYFYKPSMAYTTGTRKRRKi 119
                           699************.555566655553565442...133323666646**********.67788999*******************75 PP

                   NAM  78 ........tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                                    ++ +W++tgk++++l+ +g++ g kk++v+y  +g+++k  kt+Wvmh+y+l
  Sphfalx0228s0027.1.p 120 qtdgvqggGSEVRWHKTGKTRPILQ-DGRVQGFKKIMVLYrtSGKKSKNMKTNWVMHQYHL 179
                           5555544433678************.999***********6668999999*********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.18E-3828198IPR003441NAC domain
PROSITE profilePS5100533.74836198IPR003441NAC domain
PfamPF023651.7E-1437179IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 489 aa     Download sequence    Send to blast
MAFKERRKHM NHARVGCPTC GQVVGQLKAR VDWAVLPSGV RFDPSDEELL EHLLAKVGHG  60
SSKEHPLIND FILTLDEEDG ICRTHPENLP GMKKDGTACH YFYKPSMAYT TGTRKRRKIQ  120
TDGVQGGGSE VRWHKTGKTR PILQDGRVQG FKKIMVLYRT SGKKSKNMKT NWVMHQYHLG  180
NHEEERDGEV VVCKVFLQKQ SRTTPCDRKM HLLPIDEDGE DSEGDSEFQE LPAPGLSVGS  240
PSVSGVTREM PPTTPKLYAR SRLQGKLSHP ETTESISEIS LAQSVDPPSR LAIQVKTHSA  300
VVKSVTTPDC SFGGGNAIAC KIPAGLASNE TLNLVEPSAV LAPTEQHMVD DSVVAGIISC  360
GGEDESLEAV NLDEDHLPWE ALNHEARMAS VEDLNNCNER VVQLLCNETL NGAPLLQNQL  420
FADCNWQKCA FDVGCIAEDP ETDEVEVDPA LHDIMLDTPP DMFEEVKNVV GKQKIVIDLD  480
NSDSQSST*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A9e-163617915140Stress-induced transcription factor NAC1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024361187.11e-133uncharacterized protein LOC112275234 isoform X2
TrEMBLA0A2K1ILP61e-132A0A2K1ILP6_PHYPA; Uncharacterized protein
STRINGPP1S251_11V6.11e-132(Physcomitrella patens)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28500.12e-74NAC domain containing protein 73