PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Sphfalx0243s0003.2.p

Organism

Sphagnum fallax

Taxonomic ID

53036

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum

Family

ERF

Protein Properties

Length: 481aa MW: 52855.7 Da PI: 4.6035

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Sphfalx0243s0003.2.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	46.3	1.1e-14	126	179	1	54
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkr..krfslgkfgtaeeAakaaiaarkkle 54 s+y GVr+++ +WvAeIr+ ++ + k+++lg++ ++e+Aa a +aark l+ Sphfalx0243s0003.2.p 126 SKYYGVRFRPDLSKWVAEIRVaEWK---SvdKKVWLGTYISEEGAAHAVDAARKILR 179 7999***************6433...345********************9875 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF00847	3.8E-8	126	176	IPR001471	AP2/ERF domain
SuperFamily	SSF54171	5.69E-9	126	182	IPR016177	DNA-binding domain
CDD	cd00018	2.67E-11	126	174	No hit	No description
SMART	SM00380	2.3E-5	127	195	IPR001471	AP2/ERF domain
Gene3D	G3DSA:3.30.730.10	2.6E-13	127	189	IPR001471	AP2/ERF domain
PROSITE profile	PS51032	15.053	127	189	IPR001471	AP2/ERF domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 481 aa Download sequence Send to blast
MPESFTQPVD LSHPDLRGFN HKAAASSNTS FVRCRNCPGL QTASFQLQIC CKFVHQNTSQ 60 FEHKESNLGF AAADPFLEAT GDSTSVPSDD VQEDGANISC SRAQQDEVQN TMQATSRRPR 120 NKECSSKYYG VRFRPDLSKW VAEIRVAEWK SVDKKVWLGT YISEEGAAHA VDAARKILRC 180 NKKQKPNFSC KQLEAYAESL PPELSLKNIS DNTIFKAITE FVKGKARQYA SEFVSTPIPK 240 EIRTSTPVNN NRQPGAGGDV SPSDAAAVCQ LGSITTDSFE LVSYLDHGVK AIEMPRDFSS 300 ELSHQQLSPF HATAVIAASD NFFDEVYGEE FVDGNAHITT PCSSMMFLPG VSLDWSQQQP 360 VSASTGEAVV HQDSIFMSLE EGFMMLSQPE PTHWTQDQIF GLDFNTEHMP ANSDMWVENY 420 LGSCAEEPVY TDAPMEEVDP GRASNGSWDT KLVPSFTMSS QGDGINSCMD TLLEGVLSGH 480 *

Sequence ? help Back to Top

Protein Sequence Length: 481 aa Download sequence Send to blast

MPESFTQPVD LSHPDLRGFN HKAAASSNTS FVRCRNCPGL QTASFQLQIC CKFVHQNTSQ  60
FEHKESNLGF AAADPFLEAT GDSTSVPSDD VQEDGANISC SRAQQDEVQN TMQATSRRPR  120
NKECSSKYYG VRFRPDLSKW VAEIRVAEWK SVDKKVWLGT YISEEGAAHA VDAARKILRC  180
NKKQKPNFSC KQLEAYAESL PPELSLKNIS DNTIFKAITE FVKGKARQYA SEFVSTPIPK  240
EIRTSTPVNN NRQPGAGGDV SPSDAAAVCQ LGSITTDSFE LVSYLDHGVK AIEMPRDFSS  300
ELSHQQLSPF HATAVIAASD NFFDEVYGEE FVDGNAHITT PCSSMMFLPG VSLDWSQQQP  360
VSASTGEAVV HQDSIFMSLE EGFMMLSQPE PTHWTQDQIF GLDFNTEHMP ANSDMWVENY  420
LGSCAEEPVY TDAPMEEVDP GRASNGSWDT KLVPSFTMSS QGDGINSCMD TLLEGVLSGH  480
*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G74930.1	2e-08	ERF family protein

Link Out ? help Back to Top
Phytozome	Sphfalx0243s0003.2.p