PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0278s0005.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family bZIP
Protein Properties Length: 336aa    MW: 37620 Da    PI: 9.6525
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0278s0005.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.83.6e-112970546
                          CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46
                          k+ rr+++NReAAr+sR+RKka++++Le    +L +  ++L+
  Sphfalx0278s0005.1.p 29 KALRRLAQNREAARKSRLRKKAYVQQLESSRVKLNQLEQELQ 70
                          789*************************87666666665555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.2E-42489IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.8292771IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1705.6E-82972No hitNo description
SuperFamilySSF579591.38E-72971No hitNo description
PfamPF001702.5E-82971IPR004827Basic-leucine zipper domain
PROSITE patternPS0003603247IPR004827Basic-leucine zipper domain
PfamPF141444.9E-30128210IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    Send to blast
MADNSPRLKD TAASIADHEA ATAAVDQGKA LRRLAQNREA ARKSRLRKKA YVQQLESSRV  60
KLNQLEQELQ SVARQEHINQ HQLIPQYSRA VAGAGANAAA GAVRRPAAAR YSSLDIEYGR  120
WIEEQQRQMR NLRAALMQQE AAANDVSENQ LRLLVDENMR HYEQMFRLKA VAARSDVFHI  180
VSGMWKTPVE RICFMWMGGF RPSQLLKILI PQIEPLTEQQ LVGICNLQQS SQEAEDALSQ  240
GMEALQQSLA ETVANGLLGR SPTVANYMSQ MTMAMSKLSM LESFVHQADN LRRQVMQQML  300
RILTTHQAAR GLLGISDHFT CLQALSSLWS ARPQD*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002969636.21e-133transcription factor TGA2.3
SwissprotQ415581e-117HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLA0A2R6XAL31e-141A0A2R6XAL3_MARPO; Uncharacterized protein
STRINGEFJ228471e-133(Selaginella moellendorffii)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06950.41e-110bZIP family protein