PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0299s0005.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family ERF
Protein Properties Length: 225aa    MW: 25581.5 Da    PI: 9.9608
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0299s0005.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP232.12.8e-1067111248
                   AP2   2 gykGVrwdkkrgrWvAeIrdpseng..krkrfslgkfgtaeeAakaaia 48 
                            ykG+r+++  +r+ +eIr        ++++++lg++ ta eAa a +a
  Sphfalx0299s0005.1.p  67 SYKGIRYRPELNRYISEIRP----AlpRKRKIWLGTYKTAIEAALAFDA 111
                           6****************998....44556***************99886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103213.30167132IPR001471AP2/ERF domain
SuperFamilySSF541711.63E-1067125IPR016177DNA-binding domain
SMARTSM003804.0E-767131IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.107.0E-1667126IPR001471AP2/ERF domain
PfamPF008472.2E-567110IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    Send to blast
MSQAVERRMM YDNHSNRSGH MFQEMQSNLF RSSNQLHVES HSRGPPRVAH YRTGSSRSSG  60
HGDETTSYKG IRYRPELNRY ISEIRPALPR KRKIWLGTYK TAIEAALAFD AGVFYTGKKI  120
GYNFPEYVKN LPPLDDNLDQ DERHIAIQKR AKLAASIPHS DEDMQPSKTR EALPSPSSAG  180
RSSSNQLQYP DNLCSSKQLN DSHRPFYEFF PPVSREPSLA HRGN*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2K1KB913e-31A0A2K1KB91_PHYPA; Uncharacterized protein
STRINGPP1S87_98V6.15e-32(Physcomitrella patens)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G06746.12e-11related to AP2 9