PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0301s0006.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family ERF
Protein Properties Length: 800aa    MW: 86692.1 Da    PI: 7.2997
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0301s0006.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.62.8e-1767117256
                   AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                           +y+GVr+++ +gr++AeIrdp++   + r +lg+f+tae+Aa a++ a+++++g+
  Sphfalx0301s0006.1.p  67 RYRGVRRRP-WGRYAAEIRDPNT---KERKWLGTFDTAEDAAMAYDWAARSMRGA 117
                           69*******.**********933...5*************************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103221.90467124IPR001471AP2/ERF domain
CDDcd000183.05E-2867123No hitNo description
SuperFamilySSF541711.05E-2067124IPR016177DNA-binding domain
PfamPF008478.4E-1167116IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.4E-2967123IPR001471AP2/ERF domain
SMARTSM003801.1E-3267130IPR001471AP2/ERF domain
PRINTSPR003675.1E-96879IPR001471AP2/ERF domain
PRINTSPR003675.1E-990106IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 800 aa     Download sequence    Send to blast
MVGRIDAFAQ QQQQQQLMLL GNNESNNNNR AGVGTVSSCI RKGRTGVEAA KKGPGGMMMR  60
RSREPGRYRG VRRRPWGRYA AEIRDPNTKE RKWLGTFDTA EDAAMAYDWA ARSMRGAKAR  120
TNFVYPTHHT CIMSTALATA HNNSSTGPGG GAARGSAAAA GDDQHYHQQQ LPQVAMGFEP  180
TDHRFSPAPA NVHFQHQIRN KADWTTSTTT HRGFNHSHKS SSSSPRVHQA SGYDEISLLY  240
QSGVEKHVLA RGAMINGDTR TTTTTMPPSS QQHRQHPSQQ QQQHMDRRFQ AHLMSMTEAA  300
EGRESVVQPQ QQQQLQGRKA QWLPAVAEYV SFEQNHLHGC SMYESSATRS TAPKRFNLHT  360
PPPLQMIPDF GEGEEPVQPA TCGTLISPST CESTMTLSNG AAVSSQQSVF SCSMSSLPRK  420
LQIPPQAASV ACKYSEEADT LAQVVAQSHV QDFNRDDPMK KNAAAATTTA STGKKRAPHE  480
LRLQQQQQQR QSTTPPTPPT RTCMFSTQVS YSEDSTVSLP ADSASTTPPG SPGLFSLSSE  540
GESYARSPTA AAAAAAHAAE VSSRGDHLFS RGSSSSSSNR RGGGCCMGVV TSPSRNPDNL  600
HSILPASLSS PIGLLLNHTQ SRGDWSWISS TEEPAAAAIQ QVPQLQPVPQ LQVAQLQQCC  660
SSITPAAAAM PTEEAIKCEP GASSSSNWAL QNLCAQQLNP AAAHAWHQTT PRESSSSELC  720
CVNQKDDDSS WRDYVETVAD QQFSGLLGDV VGPSDPFPTN DINLYMESIP FPDHPLVEDS  780
ACCHQLFPFE MIEPMRIFA*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-19641231171Ethylene-responsive transcription factor ERF096
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13910.17e-14ERF family protein