PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0309s0010.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family NAC
Protein Properties Length: 475aa    MW: 52435.2 Da    PI: 8.5522
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0309s0010.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM169.79.5e-53231511128
                   NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 
                           lppGfrFhPtdeelv +yL++k++++ l++  vi+e+d+yk++PwdLp k+  +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+d
  Sphfalx0309s0010.1.p  23 LPPGFRFHPTDEELVLHYLCRKADSQLLTI-PVIAEIDLYKFDPWDLPGKAIFGEREWYFFSPRDRKYPNGARPNRAAASGYWKATGTD 110
                           79*************************999.89***************7766799********************************** PP

                   NAM  90 kevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                           k+++++  + +++g+kk Lvfykgrapkg+kt+W+mheyrl
  Sphfalx0309s0010.1.p 111 KPIYTAvgGVRKIGVKKALVFYKGRAPKGVKTNWIMHEYRL 151
                           *****9877788***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.18E-6417182IPR003441NAC domain
PROSITE profilePS5100561.20523182IPR003441NAC domain
PfamPF023652.3E-2724151IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 475 aa     Download sequence    Send to blast
MVLMASSGGV TVGRSAVEQQ LHLPPGFRFH PTDEELVLHY LCRKADSQLL TIPVIAEIDL  60
YKFDPWDLPG KAIFGEREWY FFSPRDRKYP NGARPNRAAA SGYWKATGTD KPIYTAVGGV  120
RKIGVKKALV FYKGRAPKGV KTNWIMHEYR LAEGVCTSSS QQPHRKGSLR LDDWVLCRIY  180
KKSTNSPRAV KERDNSCVEE VLASLPEIED PKLVLSQLGS FGGLMETTED QFMESLLKGE  240
NTSESNRSPS AEVESSSSPQ QSNKKSTAIA SSNTSLVENL QGGGRVRHPA SFQGRDSLAH  300
CEINPGWKKV PGFGAIANFN QQFNKYNRQL APLQMVPTSL PTSLSLQYCH LADHNMHHPS  360
SIMARAANLS IPLRDSSLLE EEEVQNNFSS PPPPRFSSSH QNEGFESITA ALNPLFQFQQ  420
PPPPITASSL TRPLEMSLLP TSTLAMQINM NSDSQTGSIP SSWRPPHYNV NPAS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A2e-77171849170Stress-induced transcription factor NAC1
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00058PBMTransfer from AT1G61110Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024392980.11e-151NAC transcription factor 47-like
RefseqXP_024392981.11e-151NAC transcription factor 47-like
TrEMBLA0A2K1JLF21e-150A0A2K1JLF2_PHYPA; Uncharacterized protein
STRINGPP1S5_359V6.11e-150(Physcomitrella patens)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.11e-86NAC domain containing protein 25