PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0784s0002.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family C2H2
Protein Properties Length: 217aa    MW: 24962.2 Da    PI: 6.3055
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0784s0002.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.50.000212343222
                          EETTTTEEESSHHHHHHHHHH CS
               zf-C2H2  2 kCpdCgksFsrksnLkrHirt 22
                          +C+ Cg sF +   + +H+r+
  Sphfalx0784s0002.1.p 23 VCSTCGPSFEDMAKYSSHLRK 43
                          6******************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF029923.8E-11166IPR004242Transposon, En/Spm-like
PROSITE profilePS501578.5592254IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    Send to blast
MWTTHDYPGF GFVSGLQTQG YKVCSTCGPS FEDMAKYSSH LRKFFYLGHT KFLPLGHDMR  60
SDPLLFSSFD MPYGDERDIP EATTFAYWRD VANRVIDPND SMVFEGSGLT RWGILNSLPY  120
WGELKIRHLL DPMHIEGNVG KAIIKQLYGE KDSNFNREAC EDFERHPDVW ITVDPNTGIE  180
QRPLAPWTLT THERRNFRNR IGEMRFPIGL NFDGKG*