PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Spipo3G0059600
Organism
Spirodela polyrhiza
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Araceae; Lemnoideae; Spirodela
Family EIL
Protein Properties Length: 75aa    MW: 8585.81 Da    PI: 10.2322
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Spipo3G0059600genomeMIPS/IBISView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN323.58.9e-08632179206
                     HHHHHHT--TT--..-----GGG--HHHH CS
            EIN3 179 lwwgelglskdqg.tppykkphdlkkawk 206
                     +w++  g+ +  +  ppykkphdlkk+wk
  Spipo3G0059600   6 EWHS--GVENVMEgFPPYKKPHDLKKVWK 32 
                     6787..99998888**************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1167681.1E-5633IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene3DG3DSA:1.10.3180.103.2E-6733IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 75 aa     Download sequence    Send to blast
MLMVKEWHSG VENVMEGFPP YKKPHDLKKV WKWRTGPLTA TARGQGDEGD LAPHCQLDRG  60
ARARTRNPRF YYTT*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-