PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Spipo6G0075600
Organism
Spirodela polyrhiza
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Araceae; Lemnoideae; Spirodela
Family bZIP
Protein Properties Length: 335aa    MW: 36300.6 Da    PI: 6.7695
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Spipo6G0075600genomeMIPS/IBISView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_141.72.4e-13115171662
                     HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   6 rerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                      + ++ +NR  A++sR +Kka++  Le k keLe+ N++L ++   lk e +++k+e
  Spipo6G0075600 115 PTPKRLRNRMKAQKSRDKKKAYMSALESKLKELEKMNSELEERCLALKIENESMKNE 171
                     5679***************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003388.8E-10109174IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.4E-14109172No hitNo description
SuperFamilySSF579598.75E-10116162No hitNo description
PROSITE profilePS5021710.208118175IPR004827Basic-leucine zipper domain
PfamPF077161.9E-10118162IPR004827Basic-leucine zipper domain
CDDcd146866.95E-12118166No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    Send to blast
MAEGKEGRSP PRGGGESKEA EEPAKTVYFV PIYAVAIVDP NKHAAKSRLS PDDQRQGSVC  60
SSESVGASQL VSPRKGIRGR AAEPEVAVQQ KRQKLIVMRK RGRIPEYDDD DPHKPTPKRL  120
RNRMKAQKSR DKKKAYMSAL ESKLKELEKM NSELEERCLA LKIENESMKN EILDADPAAQ  180
EQLVQCRENI QNEKEQQALV RSVENLADLV ESPDNEGGGA PGKYAEITDP EDPGGPELHA  240
EGGSRAAVGG GQECGALEKF VGGSDAEGSP SRYIEDNDQD DVPGQGGWPA RTSLKRVGQL  300
TAFGAGSWCS CSQKVCRRQL RAAWPGARQQ AAAV*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A1D1Y8Q31e-86A0A1D1Y8Q3_9ARAE; Transcription factor HY5
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11260.18e-14bZIP family protein