PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Spipo7G0034500
Organism
Spirodela polyrhiza
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Araceae; Lemnoideae; Spirodela
Family bZIP
Protein Properties Length: 431aa    MW: 45237 Da    PI: 6.7893
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Spipo7G0034500genomeMIPS/IBISView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_142.31.6e-13358408556
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 
                     +r+rr++kNRe+A rsR+RK+a++ eLe++  +L++eN +L++e + l+ ++
  Spipo7G0034500 358 RRQRRMIKNRESAARSRARKQAYTVELETELNQLKEENARLQEE-QVLEAMA 408
                     69***************************************966.4444444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.7E-10354419IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.116356401IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.4E-13357402No hitNo description
PfamPF001701.7E-11358401IPR004827Basic-leucine zipper domain
CDDcd147073.57E-26358412No hitNo description
SuperFamilySSF579591.06E-10358401No hitNo description
PROSITE patternPS000360361376IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0009651Biological Processresponse to salt stress
GO:0009737Biological Processresponse to abscisic acid
GO:0009739Biological Processresponse to gibberellin
GO:0010187Biological Processnegative regulation of seed germination
GO:0010200Biological Processresponse to chitin
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0048316Biological Processseed development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 431 aa     Download sequence    Send to blast
MASGASPSTA AESKAASFDG AVEAAGGVVT QHAEEHQHGE GSPAAAAAAE KQYPMARQSS  60
LLSLTLDEIQ STMCEPGKNF GSMNMDEFLS NIWTAEEGSA MASVKEGGGV AGAGTAAACG  120
EGAWDPKDHA PPVALHRQGS VSLPPTLCRK TVDEVWSEIQ RDHGQQQQQG LAAPPPPSQP  180
PYQQSGIVPR QATFGEMTLE DFLIKAGVVR EGGCIPCSSP QGLSPFSLPT SQQQLPEQQQ  240
QNQYGGFPMV GMGYGDHHRN PAADGVFHGF PQRRYQQQVP VGNGYAGGGS GGRRTSNGHA  300
RVGSPGSPVS SDGFGGHWAQ VGGDGSRADG GGAATGGGTG PAGRKRIVDG PGDRVFERRQ  360
RRMIKNRESA ARSRARKQAY TVELETELNQ LKEENARLQE EQVLEAMAER AQMKARGGSK  420
ALRHCNSCVW *
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00294DAPTransfer from AT2G36270Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010907582.11e-90protein ABSCISIC ACID-INSENSITIVE 5
RefseqXP_010907583.11e-90protein ABSCISIC ACID-INSENSITIVE 5
RefseqXP_010907584.11e-90protein ABSCISIC ACID-INSENSITIVE 5
RefseqXP_029117382.11e-90protein ABSCISIC ACID-INSENSITIVE 5
RefseqXP_029117383.11e-90protein ABSCISIC ACID-INSENSITIVE 5
TrEMBLA0A1D1XXB41e-106A0A1D1XXB4_9ARAE; Protein ABSCISIC ACID-INSENSITIVE 5
STRINGXP_008804818.11e-81(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP38303558
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49720.27e-33abscisic acid responsive element-binding factor 1