PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Spipo8G0048100
Organism
Spirodela polyrhiza
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Araceae; Lemnoideae; Spirodela
Family VOZ
Protein Properties Length: 510aa    MW: 56652.5 Da    PI: 5.9536
Description VOZ family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Spipo8G0048100genomeMIPS/IBISView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1VOZ433.13.9e-1332144301217
             VOZ   1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaael 95 
                     pp safl+pkcalwdc+rpa+gs+w+qdycs +ha lalneg+pg++pvlrp+gidlkdg+lfaal ak+qgk+vgipecegaat+kspwna+el
  Spipo8G0048100 214 PPASAFLRPKCALWDCPRPAKGSDWFQDYCSCVHAILALNEGPPGMNPVLRPGGIDLKDGPLFAALIAKTQGKNVGIPECEGAATTKSPWNAPEL 308
                     789******************************************************************************************** PP

             VOZ  96 fdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklv 190
                     fdl++lege++rewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqp+++fewhlyeyei+++da+alyrlelk +
  Spipo8G0048100 309 FDLAVLEGESMREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMKEFGGLKRSYYMDPQPLTNFEWHLYEYEISNCDACALYRLELKFT 403
                     *********************************************************************************************** PP

             VOZ 191 dekksakgkvskdsladlqkklgrlta 217
                     d+kksakgkvs+dsl++lq+++g l+a
  Spipo8G0048100 404 DSKKSAKGKVSCDSLVNLQQQMGMLNA 430
                     ***********************9976 PP
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009408Biological Processresponse to heat
GO:0009414Biological Processresponse to water deprivation
GO:0009631Biological Processcold acclimation
GO:0009816Biological Processdefense response to bacterium, incompatible interaction
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0048578Biological Processpositive regulation of long-day photoperiodism, flowering
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 510 aa     Download sequence    Send to blast
MGKGSKTACK SASHQLFKDK AKNRVDDLQG MFNDLQFARK ESRSSDVAIL EEQVNQMLRE  60
WKAELNEASP ASSLIGGSHV SSDLSSDIRR LLQLCEEEDD ATSKLAESPH INPKPEPDAQ  120
ENCIRRLQEG KDYYVHQELS EHGFQDVDVC KTNVSIGLHH GNVDCMESGD RLDYQQFNIH  180
QELPHDLFLQ YDNGGRHGEN VAQHISDLLP AICPPASAFL RPKCALWDCP RPAKGSDWFQ  240
DYCSCVHAIL ALNEGPPGMN PVLRPGGIDL KDGPLFAALI AKTQGKNVGI PECEGAATTK  300
SPWNAPELFD LAVLEGESMR EWLFFDKPRR AFESGNRKQR SLPDYSGRGW HESRKQVMKE  360
FGGLKRSYYM DPQPLTNFEW HLYEYEISNC DACALYRLEL KFTDSKKSAK GKVSCDSLVN  420
LQQQMGMLNA EPPLDSKRSA KGRTKFSQKD SPGSVCLSLA SISHDSNGGP LYASSEHGGP  480
ATESFVYGPS MPYGYPAESL NSIMHRDTS*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By far-red light. {ECO:0000269|PubMed:22904146}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010916038.10.0transcription factor VOZ1 isoform X1
SwissprotQ9SGQ00.0VOZ1_ARATH; Transcription factor VOZ1
TrEMBLA0A1D1ZGU80.0A0A1D1ZGU8_9ARAE; Transcription factor MYC4
STRINGXP_008784453.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP23433888
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28520.20.0vascular plant one zinc finger protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Yasui Y,Kohchi T
    VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis.
    Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5
    [PMID:25351333]
  3. Kumar S,Choudhary P,Gupta M,Nath U
    VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition.
    Plant Physiol., 2018. 176(4): p. 2917-2930
    [PMID:29507119]
  4. Song C,Lee J,Kim T,Hong JC,Lim CO
    VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis.
    Planta, 2018. 247(6): p. 1439-1448
    [PMID:29536220]