PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRAES3BF001900070CFD_t1
Common NameTRAES_3BF001900070CFD_c1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 343aa    MW: 37353.1 Da    PI: 9.8837
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRAES3BF001900070CFD_t1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_148.81.6e-15273318551
                              CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                   bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 
                              +r++r++kNRe+A rsR+RK+a++ eLe+kv  Le+eN++Lkk+ +e
  TRAES3BF001900070CFD_t1 273 RRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLKKQ-KE 318
                              69****************************************65.34 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.7E-14269341IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.702271316IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.7E-15271316No hitNo description
CDDcd147078.63E-25273322No hitNo description
PfamPF001706.8E-13273317IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.81E-11273319No hitNo description
PROSITE patternPS000360276291IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    Send to blast
MGSRKMASQQ GRGDAGTSQP GRGDAGTSQR GQVQSLARQG SLYSLTLDEV QNHLGEPLQS  60
MNLDELLRTV FPDDLEPDGA TTSQCVPSSS LLRQGSITMP TELSKKTVDE VWKGIQETPK  120
RSVQGSGRRK RERQPTLGEM TLEDFLVQAG VVSQGFLKDT SDVGNLGLMG RGATAAGATD  180
LTSGAQWLGQ YQQQIAASAI NTHQHVQQIV PAAYMPIQLV PQPLNVVGPG ATLGSAYSDG  240
QSTSPMISPI SDSQTPGRKR GVSGDVPNKF VERRQKRMIK NRESAARSRA RKQAYTNELE  300
NKVSRLEEEN ERLKKQKELN MMLCSVPLPE PKYQLRRTCS AAF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1116121ETPKRS
2126133GRRKRERQ
Functional Description ? help Back to Top
Source Description
UniProtBinds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00409DAPTransfer from AT3G56850Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703060.0HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020190745.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X2
SwissprotQ9LES33e-83AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBLA0A077S1190.0A0A077S119_WHEAT; Uncharacterized protein
TrEMBLA0A446Q2V30.0A0A446Q2V3_TRITD; Uncharacterized protein
STRINGTraes_3B_5D3F7382A.10.0(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27073883
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.11e-85ABA-responsive element binding protein 3
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]
  2. Kim H, et al.
    ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis.
    Plant Mol. Biol., 2016. 90(3): p. 303-15
    [PMID:26667153]
  3. Song C,Kim T,Chung WS,Lim CO
    The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions.
    Mol. Cells, 2017. 40(8): p. 577-586
    [PMID:28756655]