PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRAES3BF024700170CFD_t1
Common NameTRAES_3BF024700170CFD_c1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 190aa    MW: 21850 Da    PI: 4.3303
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRAES3BF024700170CFD_t1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP224.47.2e-081153149
                      AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaa 49
                             sg+ GVr+++ +g W +e   +se g  +r+++ ++ +a eAa a++ a
  TRAES3BF024700170CFD_t1 11 SGFFGVRQKP-SGNWGVE---FSEAG--RRWWIDTYPSAHEAACAYDVA 53
                             6777****99.7******...98865..******************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.76E-141168No hitNo description
SuperFamilySSF541715.49E-101167IPR016177DNA-binding domain
SMARTSM003804.3E-61273IPR001471AP2/ERF domain
PROSITE profilePS5103214.8951267IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.107.0E-141368IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    Send to blast
MAPKKTPKGK SGFFGVRQKP SGNWGVEFSE AGRRWWIDTY PSAHEAACAY DVAVWRAERP  60
RSHLNFPEIE SRAIAEMLVP QGINMKEITT KKPSVVVSAG ETNEEAMARF AREHPEYVQA  120
ELEHYWKRKA EQKKKEDEAG PSTVIPIESS SEEDCADYLE EEEEEEEEEE GCDDPTKEEF  180
WEQFRSSDEE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703060.0HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020191686.11e-111ethylene-responsive transcription factor RAP2-2-like
TrEMBLA0A077RV891e-135A0A077RV89_WHEAT; Uncharacterized protein
STRINGEMT288791e-68(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1681133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05410.12e-10DRE-binding protein 2A
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]