PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRAES3BF099600120CFD_t1

Common Name

TRAES_3BF099600120CFD_c1

Organism

Triticum aestivum

Taxonomic ID

4565

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bZIP

Protein Properties

Length: 255aa MW: 28673.3 Da PI: 10.1124

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRAES3BF099600120CFD_t1	genome	IWGSC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	19.8	1.8e-06	95	145	7	49
HHCHHHHHHHHHHHHHHHH........HHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 7 errkqkNReAArrsRqRKk........aeieeLeekvkeLeaeNkaLkkel 49 rr++kNRe+A+rs +RK+ a++ eLe + L++eN +Lk e TRAES3BF099600120CFD_t1 95 HRRMIKNRESATRSCARKQslsfsilqAYTVELEAELNHLKEENARLKAEE 145 69****************644444444788888888888888888888764 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	6.3E-8	92	144	No hit	No description
CDD	cd14707	1.32E-16	93	142	No hit	No description
SuperFamily	SSF57959	7.96E-5	95	146	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 255 aa Download sequence Send to blast
MMYPMALANI MFQVMGDDMG FVPNGYVVIF VVPPSPPRQG SVGIVSHGLS DGRSAMTKAD 60 MMNYMGDRAM MENGGARKHG APDDQSCKRS IERCHRRMIK NRESATRSCA RKQSLSFSIL 120 QAYTVELEAE LNHLKEENAR LKAEEKTILL TKKKNAGGED DGAAQGERER QEGWRLVAAL 180 RQLHLVKGDL PFNFHSRAGK RMRMNCGYLS FLERVKKILL TKKQMLVEKM IEQSKENVNA 240 KKGGTLSRCC GNCIW

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription factor that possesses transactivation activity in yeast (PubMed:17604002, PubMed:21055780, PubMed:18236009). Involved in abscisic acid (ABA) signaling pathway. Binds to the G-box motif 5'-CACGTG-3' of TRAB1 gene promoter (PubMed:17604002). Involved in the regulation of pollen maturation. May act as negative regulator of salt stress response (PubMed:18236009). Together with PYL5, PP2C30 and SAPK2, is part of an ABA signaling unit that modulates seed germination and early seedling growth (PubMed:22071266). {ECO:0000269\|PubMed:17604002, ECO:0000269\|PubMed:18236009, ECO:0000269\|PubMed:21055780, ECO:0000269\|PubMed:22071266}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Induced by abscisic acid (ABA) (PubMed:21055780, PubMed:18236009, PubMed:22071266). Induced by salt stress. Down-regulated by cold and drought stresses (PubMed:18236009). {ECO:0000269\|PubMed:18236009, ECO:0000269\|PubMed:21055780, ECO:0000269\|PubMed:22071266}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	HG670306	0.0	HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020182640.1	4e-70	protein ABSCISIC ACID-INSENSITIVE 5-like
Swissprot	Q8RZ35	2e-47	ABI5_ORYSJ; bZIP transcription factor ABI5 homolog
TrEMBL	A0A077RRE3	0.0	A0A077RRE3_WHEAT; Uncharacterized protein
TrEMBL	A0A446Q622	0.0	A0A446Q622_TRITD; Uncharacterized protein
STRING	Traes_3DL_E21790878.1	1e-74	(Triticum aestivum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP3830	35	58

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36270.1	4e-15	bZIP family protein

Publications ? help Back to Top
Zou M,Guan Y,Ren H,Zhang F,Chen F A bZIP transcription factor, OsABI5, is involved in rice fertility and stress tolerance. Plant Mol. Biol., 2008. 66(6): p. 675-83 [PMID:18236009] Kim H, et al. A rice orthologue of the ABA receptor, OsPYL/RCAR5, is a positive regulator of the ABA signal transduction pathway in seed germination and early seedling growth. J. Exp. Bot., 2012. 63(2): p. 1013-24 [PMID:22071266] Brenchley R, et al. Analysis of the bread wheat genome using whole-genome shotgun sequencing. Nature, 2012. 491(7426): p. 705-10 [PMID:23192148] Bhatnagar N, et al. The protein phosphatase 2C clade A protein OsPP2C51 positively regulates seed germination by directly inactivating OsbZIP10. Plant Mol. Biol., 2017. 93(4-5): p. 389-401 [PMID:28000033]