PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRAES3BF111600130CFD_t1

Common Name

TRAES_3BF111600130CFD_c1

Organism

Triticum aestivum

Taxonomic ID

4565

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bZIP

Protein Properties

Length: 391aa MW: 42406.1 Da PI: 5.5438

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRAES3BF111600130CFD_t1	genome	IWGSC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	41.9	2.2e-13	307	357	5	55
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 +r rr++kNRe+A rsR+RK+a++ eLe + L++eN +Lk e +++ + TRAES3BF111600130CFD_t1 307 RRHRRMIKNRESAARSRARKQAYTVELEAELNHLKEENARLKAEEKTILLT 357 689***************************************987766554 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	4.8E-12	302	367	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.852	305	350	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	1.2E-10	307	355	IPR004827	Basic-leucine zipper domain
CDD	cd14707	1.24E-24	307	361	No hit	No description
Gene3D	G3DSA:1.20.5.170	1.2E-13	307	354	No hit	No description
SuperFamily	SSF57959	9.38E-11	307	353	No hit	No description
PROSITE pattern	PS00036	0	310	325	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 391 aa Download sequence Send to blast
MASEMSKDVK FSEEEVTSHP RVLEGEEQPV VAPARQSSIF ALTLDELQYS VCEAGRNFGS 60 MNMDEFMSNI WNAEEFQAAT GGGLVGMEMA PVVGAGGGRG GGDAGGSNLA RQESFSLPPP 120 MCQKTVEEVW DEINREPRPV HVQPQAAQPS QQPPVQPSVA TNDRQGTLGE MTLEQFLVKA 180 GVVRGSGAGG QAPVPVDMVH AQMNPAQQGQ QPGPMMYPMA PANGMFPVMG YVKEFIPNGY 240 ARIVVVPPPP PPQGGVGIMS PGSSDGRSAM TQADMMNCMG DGTMMESGGT WKRGAPEDQS 300 CERSIERRHR RMIKNRESAA RSRARKQAYT VELEAELNHL KEENARLKAE EKTILLTKKQ 360 MLVEKMIEQS KENVNAKKGG TLSRRCGSCI W

Sequence ? help Back to Top

Protein Sequence Length: 391 aa Download sequence Send to blast

MASEMSKDVK FSEEEVTSHP RVLEGEEQPV VAPARQSSIF ALTLDELQYS VCEAGRNFGS  60
MNMDEFMSNI WNAEEFQAAT GGGLVGMEMA PVVGAGGGRG GGDAGGSNLA RQESFSLPPP  120
MCQKTVEEVW DEINREPRPV HVQPQAAQPS QQPPVQPSVA TNDRQGTLGE MTLEQFLVKA  180
GVVRGSGAGG QAPVPVDMVH AQMNPAQQGQ QPGPMMYPMA PANGMFPVMG YVKEFIPNGY  240
ARIVVVPPPP PPQGGVGIMS PGSSDGRSAM TQADMMNCMG DGTMMESGGT WKRGAPEDQS  300
CERSIERRHR RMIKNRESAA RSRARKQAYT VELEAELNHL KEENARLKAE EKTILLTKKQ  360
MLVEKMIEQS KENVNAKKGG TLSRRCGSCI W

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription factor that possesses transactivation activity in yeast (PubMed:17604002, PubMed:21055780, PubMed:18236009). Involved in abscisic acid (ABA) signaling pathway. Binds to the G-box motif 5'-CACGTG-3' of TRAB1 gene promoter (PubMed:17604002). Involved in the regulation of pollen maturation. May act as negative regulator of salt stress response (PubMed:18236009). Together with PYL5, PP2C30 and SAPK2, is part of an ABA signaling unit that modulates seed germination and early seedling growth (PubMed:22071266). {ECO:0000269\|PubMed:17604002, ECO:0000269\|PubMed:18236009, ECO:0000269\|PubMed:21055780, ECO:0000269\|PubMed:22071266}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Induced by abscisic acid (ABA) (PubMed:21055780, PubMed:18236009, PubMed:22071266). Induced by salt stress. Down-regulated by cold and drought stresses (PubMed:18236009). {ECO:0000269\|PubMed:18236009, ECO:0000269\|PubMed:21055780, ECO:0000269\|PubMed:22071266}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	HG670306	0.0	HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020182640.1	0.0	protein ABSCISIC ACID-INSENSITIVE 5-like
Swissprot	Q8RZ35	1e-151	ABI5_ORYSJ; bZIP transcription factor ABI5 homolog
TrEMBL	A0A446Q6D7	0.0	A0A446Q6D7_TRITD; Uncharacterized protein
TrEMBL	W5CT68	0.0	W5CT68_WHEAT; Uncharacterized protein
STRING	Traes_3B_3A8224218.2	0.0	(Triticum aestivum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP3830	35	58

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	2e-35	ABA-responsive element binding protein 3

Publications ? help Back to Top
Zou M,Guan Y,Ren H,Zhang F,Chen F A bZIP transcription factor, OsABI5, is involved in rice fertility and stress tolerance. Plant Mol. Biol., 2008. 66(6): p. 675-83 [PMID:18236009] Kim H, et al. A rice orthologue of the ABA receptor, OsPYL/RCAR5, is a positive regulator of the ABA signal transduction pathway in seed germination and early seedling growth. J. Exp. Bot., 2012. 63(2): p. 1013-24 [PMID:22071266] Brenchley R, et al. Analysis of the bread wheat genome using whole-genome shotgun sequencing. Nature, 2012. 491(7426): p. 705-10 [PMID:23192148] Bhatnagar N, et al. The protein phosphatase 2C clade A protein OsPP2C51 positively regulates seed germination by directly inactivating OsbZIP10. Plant Mol. Biol., 2017. 93(4-5): p. 389-401 [PMID:28000033]