PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRAES3BF117100130CFD_t1
Common NameTRAES_3BF117100130CFD_c1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 259aa    MW: 28257.4 Da    PI: 7.1667
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRAES3BF117100130CFD_t1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.96.1e-10130166541
                              CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                   bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeae 41 
                              kr +r + NR +A+rsR RK+++i eLe+ v +L+++
  TRAES3BF117100130CFD_t1 130 KRVKRIIANRQSAQRSRVRKLQYISELERSVTSLQTK 166
                              899*****************************99876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003387.2E-11126190IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.128128184IPR004827Basic-leucine zipper domain
PfamPF001702.0E-9130178IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.6E-12130184No hitNo description
SuperFamilySSF579597.88E-11130184No hitNo description
CDDcd147032.61E-22131181No hitNo description
PROSITE patternPS000360133148IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    Send to blast
MAQLPPKIPR GGAQQQPSWV DEFLDFSAAK RGAHRRTVSD SVAFLDDSNA GVGAHQFDRL  60
DDDQLMSMFS DELAPQRQAA PAASASSPSD HNSVNKEKQD KGDAEEAQSD CNGDGAAPGQ  120
PSSPATIDPK RVKRIIANRQ SAQRSRVRKL QYISELERSV TSLQTKVLAL SPRVAFLDHQ  180
RSLLTLGNSH LKQRIAALAQ DKIFKDAHQE ALKKEIEWLR QVYQQQSLRT MEPPTDDGGP  240
LVRGDSNGLI ASEGTAAPS
Functional Description ? help Back to Top
Source Description
UniProtTranscription regulator. {ECO:0000250}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Down-regulated by dehydration and salt stress. {ECO:0000269|PubMed:18065552}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703060.0HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020191576.11e-157basic leucine zipper 2-like
SwissprotQ5QNI51e-101BZP02_ORYSJ; Basic leucine zipper 2
TrEMBLA0A077RY470.0A0A077RY47_WHEAT; Uncharacterized protein
STRINGMLOC_72368.41e-146(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP132238125
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58120.13e-89bZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]