PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRAES3BF117500140CFD_t1
Common NameTRAES_3BF117500140CFD_c1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 178aa    MW: 19999.7 Da    PI: 6.5126
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRAES3BF117500140CFD_t1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.70.00047103130635
                              HHHHHHHHHHHHHHHHHHHCTSCC.C...TT CS
                      HLH   6 nerErrRRdriNsafeeLrellPk.askaps 35 
                              +++Er RR+   +++ +L++ +P+ +   ++
  TRAES3BF117500140CFD_t1 103 SIAERERRASNSKRLRRLQDFVPNmD---KQ 130
                              689********************966...44 PP
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    Send to blast
MGMAMPALMP SADVDESITV DNGSNDLSRS FSISSSDDTN SIIMFSTPGS KKAKVLIDTD  60
GGMFGMLTTY LDMPGMDDYL QLQQDFIACT VHTKHGCATH PRSIAERERR ASNSKRLRRL  120
QDFVPNMDKQ TTMSDKDLEY LLISGERVAS RPKRPSSWWY PTPLGFFFFH AYTALAFF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703061e-101HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020198304.11e-50transcription factor bHLH128-like
TrEMBLA0A077RVX31e-130A0A077RVX3_WHEAT; Uncharacterized protein
TrEMBLA0A446Q4R51e-130A0A446Q4R5_TRITD; Uncharacterized protein
STRINGTraes_3B_9A9BF184C.11e-51(Triticum aestivum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05805.14e-23bHLH family protein
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]