PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRAES3BF273700010CFD_t1
Common NameTRAES_3BF273700010CFD_c1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family BES1
Protein Properties Length: 182aa    MW: 19755.1 Da    PI: 9.2508
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRAES3BF273700010CFD_t1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822127.81.3e-3955146295
                   DUF822   2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssas 87 
                              +s r+pt +ErEnn++RERrRR++a++iyaGLRa+++y+lpk+aD+n+Vl+ALc+eAG+vv+d+G++ r   + +     a  s++
  TRAES3BF273700010CFD_t1  55 TSLRHPTPRERENNRQRERRRRQVATRIYAGLRANAGYALPKHADQNDVLRALCAEAGYVVDDEGNVTRCPERSP--GVGASGSSD 138
                              689******************************************************************444444..555555555 PP

                   DUF822  88 aspesslq 95 
                                + ss +
  TRAES3BF273700010CFD_t1 139 HLQPSSHS 146
                              55545444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056872.5E-2957130IPR008540BES1/BZR1 plant transcription factor, N-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    Send to blast
MEGVAKSIMA PMEVAGAGRE EAEAAMEVAG RRGCIRSTRG PWTVRRQARG GAVKTSLRHP  60
TPRERENNRQ RERRRRQVAT RIYAGLRANA GYALPKHADQ NDVLRALCAE AGYVVDDEGN  120
VTRCPERSPG VGASGSSDHL QPSSHSGATE ATAGDIHQAL LEPEAEPKHK ISLELTLSFS  180
YM
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A5e-1224123338437Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B5e-1224123338437Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C5e-1224123338437Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D5e-1224123338437Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703060.0HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010232995.14e-62BES1/BZR1 homolog protein 2
TrEMBLA0A077RQK71e-130A0A077RQK7_WHEAT; Uncharacterized protein
STRINGTraes_3B_31C92ED65.21e-68(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP132013032
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36780.16e-15BES1/BZR1 homolog 2
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]