PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_00706-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 253aa    MW: 28535 Da    PI: 9.6954
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_00706-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM42.52e-1329043126
              NAM  43 ePwdLp.k.....kvkaeek......ewyfFskrdk..kyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWv 122
                      +Pw+Lp +     k     +      + y+ +++     y+t++r+ r+t+ g+W+   +d+ + +++++ vg+k+t+ f+   +++g kt+W+
  TRIUR3_00706-P1   2 DPWELPgMiarnnK-----RgggmmrDKYYLTNHTAlvYYNTSSRQVRTTN-GFWQPHAHDTVIRAEHDRIVGIKRTIKFH---QHTGAKTNWI 86 
                      8*****43444321.....12222335577777665224567888888655.*****************************...78899***** PP

              NAM 123 mhey 126
                      m+ y
  TRIUR3_00706-P1  87 MNIY 90 
                      *987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100514.5731124IPR003441NAC domain
SuperFamilySSF1019412.75E-11296IPR003441NAC domain
PfamPF023651.3E-52590IPR003441NAC domain
PROSITE profilePS5080811.745178235IPR003656Zinc finger, BED-type
SMARTSM006141.5E-11178233IPR003656Zinc finger, BED-type
PfamPF028923.4E-6181226IPR003656Zinc finger, BED-type
SuperFamilySSF576674.64E-7181231No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    Send to blast
MDPWELPGMI ARNNKRGGGM MRDKYYLTNH TALVYYNTSS RQVRTTNGFW QPHAHDTVIR  60
AEHDRIVGIK RTIKFHQHTG AKTNWIMNIY YSLIEGDSFC PGHHHDHEFG APSEDTSFSS  120
PHPRSRPMHY YPKHHSDPRL KSYMEHLGNL LFSDADPDNS AGRGDPPTAD HGQSKKRKKI  180
SNVWDYFTKI FARDINGKVV TYAVCNHCCK ILSGSSKNGT SQLARHACPC KFKPVAAGRN  240
AKDSGGDINV PSS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1174178KKRKK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020149352.17e-84uncharacterized protein LOC109734557 isoform X1
RefseqXP_020149353.12e-84uncharacterized protein LOC109734557 isoform X2
TrEMBLM7YNN50.0M7YNN5_TRIUA; Uncharacterized protein
STRINGTRIUR3_00706-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1859089
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02450.12e-09NAC domain containing protein 35