PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIUR3_01111-P1

Organism

Triticum urartu

Taxonomic ID

4572

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 708aa MW: 81556.6 Da PI: 6.7851

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIUR3_01111-P1	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	49.7	1.2e-15	104	184	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fY+++A +GF r+ +++k+ +k ++ C+++gk +++++ +++r+ ++ +C+ak+ vk++ +++we t +++eHnH+l+p TRIUR3_01111-P1 104 FYSTHAMLTGFAARRGTNYKR------KKFHLLCNRSGKLKPTQDL--QRKRKVNVLGSQCQAKVIVKLH-NEQWEFTGVKHEHNHPLCP 184 9*****************9......4678*******9988..88888889999******9.9**************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	2.5E-13	104	184	IPR004330	FAR1 DNA binding domain
Pfam	PF10551	1.2E-27	307	399	IPR018289	MULE transposase domain
PROSITE profile	PS50966	9.124	589	625	IPR007527	Zinc finger, SWIM-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0008270	Molecular Function	zinc ion binding

Sequence ? help Back to Top
Protein Sequence Length: 708 aa Download sequence Send to blast
QENASNGIGT TVQGLLADML HKQTNSVDPT VQHAEEQDQL HDVTEGHELC SNDTSSGSDA 60 GSSSGSELDT ELGKCFYPSI EALENSRPPE VGMKFPTLED AECFYSTHAM LTGFAARRGT 120 NYKRKKFHLL CNRSGKLKPT QDLQRKRKVN VLGSQCQAKV IVKLHNEQWE FTGVKHEHNH 180 PLCPSPSLTS FFLDHKYLSS EEKLFLRVLQ QSRVNPRKAM NIFQRMRSNF GNVSSSNEKD 240 MSNSQCVDQW RKENSDVETA LKRFKELELR NLGFSYTMQK DEDNIVRSLF WTDARSKVDY 300 EIFGDFISFS TSYSTNRHNM PFTPIIGVNN HGRILVFGCA LLQDQKAETF KWMFQTFLHV 360 MRGKLPKTII IDQDEGMVKA IAEVMPQVRH RLCKFSVMRK AQEMLGAFMA ARGNMNAELH 420 SLVDNSLTEK EFEEGWAVLI ERYDASENEY LRLMWKTRKN WVPVYFQADF YPFVESAEHG 480 EGSNLLFKDN VLPKDRIEKF IEQYERIQEG IVKTEEEDTL QSATEPAYFS MQPIEKHAAR 540 IYTRQIFLRV QKELYYSTAL NAHEIQGGAA YRLEKVFDYE NPEFDRNSFE VLVDPGTHTF 600 KCQCAKFTRD GILCCHIFRV FTQLGVIEIP AQYIVPRWAR EFREERLKEY EEKCSKRTEE 660 RKRCVMLLGK MADIGKGICA DSAKSGCFML ELDKVQEKLV GADGQIVL

Sequence ? help Back to Top

Protein Sequence Length: 708 aa Download sequence Send to blast

QENASNGIGT TVQGLLADML HKQTNSVDPT VQHAEEQDQL HDVTEGHELC SNDTSSGSDA  60
GSSSGSELDT ELGKCFYPSI EALENSRPPE VGMKFPTLED AECFYSTHAM LTGFAARRGT  120
NYKRKKFHLL CNRSGKLKPT QDLQRKRKVN VLGSQCQAKV IVKLHNEQWE FTGVKHEHNH  180
PLCPSPSLTS FFLDHKYLSS EEKLFLRVLQ QSRVNPRKAM NIFQRMRSNF GNVSSSNEKD  240
MSNSQCVDQW RKENSDVETA LKRFKELELR NLGFSYTMQK DEDNIVRSLF WTDARSKVDY  300
EIFGDFISFS TSYSTNRHNM PFTPIIGVNN HGRILVFGCA LLQDQKAETF KWMFQTFLHV  360
MRGKLPKTII IDQDEGMVKA IAEVMPQVRH RLCKFSVMRK AQEMLGAFMA ARGNMNAELH  420
SLVDNSLTEK EFEEGWAVLI ERYDASENEY LRLMWKTRKN WVPVYFQADF YPFVESAEHG  480
EGSNLLFKDN VLPKDRIEKF IEQYERIQEG IVKTEEEDTL QSATEPAYFS MQPIEKHAAR  540
IYTRQIFLRV QKELYYSTAL NAHEIQGGAA YRLEKVFDYE NPEFDRNSFE VLVDPGTHTF  600
KCQCAKFTRD GILCCHIFRV FTQLGVIEIP AQYIVPRWAR EFREERLKEY EEKCSKRTEE  660
RKRCVMLLGK MADIGKGICA DSAKSGCFML ELDKVQEKLV GADGQIVL

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020178460.1	0.0	protein FAR1-RELATED SEQUENCE 9-like
TrEMBL	T1L9G9	0.0	T1L9G9_TRIUA; Uncharacterized protein
STRING	TRIUR3_01111-P1	0.0	(Triticum urartu)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP18	32	967

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27110.2	6e-82	FAR1-related sequence 3