PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_01793-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family YABBY
Protein Properties Length: 71aa    MW: 7275.77 Da    PI: 8.3823
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_01793-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY578.4e-181357751
            YABBY  7 seqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnla 51
                      e++ yvqC fC til+vsvP + l+k+v+v+CG+C+ +lsv++a
  TRIUR3_01793-P1 13 DERLGYVQCRFCATILLVSVPCSGLLKMVAVQCGCCAGVLSVSVA 57
                     6899**************************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF046907.5E-171357IPR006780YABBY protein
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0007275Biological Processmulticellular organism development
Sequence ? help Back to Top
Protein Sequence    Length: 71 aa     Download sequence    Send to blast
MSSSAPRPAL GLDERLGYVQ CRFCATILLV SVPCSGLLKM VAVQCGCCAG VLSVSVASPP  60
PPPPPQPLLP K
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020166499.14e-23protein YABBY 7-like
SwissprotA2PZN82e-17YAB7_ORYSJ; Protein YABBY 7
TrEMBLM7ZLS43e-40M7ZLS4_TRIUA; Uncharacterized protein
STRINGTRIUR3_01793-P14e-41(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP136252831
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45190.11e-10YABBY family protein