PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_02376-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 381aa    MW: 41240.6 Da    PI: 8.3792
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_02376-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY103.98.9e-33119178160
                      ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
             WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                      ++DgynWrKYGqK+vkgse+prsYY+Ct+++C++kkkvers  d+++++i+Y+g H+h+k
  TRIUR3_02376-P1 119 VEDGYNWRKYGQKQVKGSENPRSYYKCTYNNCSMKKKVERSLADGRITQIVYKGAHDHPK 178
                      58********************************************************85 PP
2WRKY103.79.8e-33264322159
                      ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                      ldDg++WrKYGqK+vkg+++prsYY+Ct+ gCpv+k+ver+++d+++v++tYeg+H h+
  TRIUR3_02376-P1 264 LDDGFRWRKYGQKVVKGNPNPRSYYKCTTVGCPVRKHVERASHDNRAVITTYEGKHSHD 322
                      59********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.0E-28110179IPR003657WRKY domain
PROSITE profilePS5081126.016114179IPR003657WRKY domain
SuperFamilySSF1182909.15E-26117179IPR003657WRKY domain
SMARTSM007741.4E-34119178IPR003657WRKY domain
PfamPF031061.1E-24120177IPR003657WRKY domain
Gene3DG3DSA:2.20.25.806.0E-36249324IPR003657WRKY domain
SuperFamilySSF1182905.23E-29256324IPR003657WRKY domain
PROSITE profilePS5081137.436259324IPR003657WRKY domain
SMARTSM007747.0E-38264323IPR003657WRKY domain
PfamPF031061.9E-25265322IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 381 aa     Download sequence    Send to blast
MSSSTGSLDH AGFTFTPPPF ITSFTELLSG SGAGDAERSP RGFNRGGRAG ASKFKSAQPP  60
SLPISSPFSC FSIPAGLSPA ELLDSPVLLN YSHEQQEQQQ EVVQVSNKSS SSSGNNKQVE  120
DGYNWRKYGQ KQVKGSENPR SYYKCTYNNC SMKKKVERSL ADGRITQIVY KGAHDHPKPL  180
STRRNSSGCA AVVAEDHTNG SEHSGPTPEN SSVTFGDDEA DKPETKRRKE HGDNEGSSGG  240
TGGCGKPVRE PRLVVQTLSD IDILDDGFRW RKYGQKVVKG NPNPRSYYKC TTVGCPVRKH  300
VERASHDNRA VITTYEGKHS HDVPIGRGRA LPASSSSDSS AVIWPAAAVQ APYTLEMLAG  360
HPGYAAKDEP RDDMFVESLL C
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A1e-34119324877Probable WRKY transcription factor 4
2lex_A1e-34119324877Probable WRKY transcription factor 4
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription repressor (By similarity). Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. Negative regulator of both gibberellic acid (GA) and abscisic acid (ABA) signaling in aleurone cells, probably by interfering with GAM1, via the specific repression of GA- and ABA-induced promoters (By similarity). {ECO:0000250|UniProtKB:Q6IEQ7, ECO:0000250|UniProtKB:Q6QHD1}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by abscisic acid (ABA) in aleurone cells, embryos, roots and leaves (PubMed:25110688). Slightly down-regulated by gibberellic acid (GA) (By similarity). Accumulates in response to jasmonic acid (MeJA) (PubMed:16919842). {ECO:0000250|UniProtKB:Q6IEQ7, ECO:0000269|PubMed:16919842, ECO:0000269|PubMed:25110688}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEF3683640.0EF368364.1 Triticum aestivum WRKY transcription factor (WRKY53-b) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020151406.10.0probable WRKY transcription factor 26
SwissprotQ6B6R45e-98WRK24_ORYSI; WRKY transcription factor WRKY24
TrEMBLM7YZB60.0M7YZB6_TRIUA; Putative WRKY transcription factor 33
STRINGTRIUR3_02376-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP85333448
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38470.12e-88WRKY DNA-binding protein 33
Publications ? help Back to Top
  1. Basu S,Roychoudhury A
    Expression profiling of abiotic stress-inducible genes in response to multiple stresses in rice (Oryza sativa L.) varieties with contrasting level of stress tolerance.
    Biomed Res Int, 2014. 2014: p. 706890
    [PMID:25110688]