PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_03056-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 284aa    MW: 31029.5 Da    PI: 7.1785
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_03056-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY66.64e-21104165258
                      --SS-EEEEEEE--TT-SS-EEEEEE-ST....T---EEEEEE-S.SSTTEEEEEEES--SS CS
             WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa....gCpvkkkversa.edpkvveitYegeHnh 58 
                      dDg+ W KYGqK ++gs++pr+Y+rC+++    gCp++++v+rs+ +dp + + tY  +H++
  TRIUR3_03056-P1 104 DDGFVWTKYGQKGIRGSDHPRHYFRCAYTldagGCPARRQVQRSEeHDPPLYVLTYFADHTC 165
                      8**************************9999999*********973699***********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.4E-2098165IPR003657WRKY domain
SuperFamilySSF1182906.15E-19101165IPR003657WRKY domain
SMARTSM007743.1E-24103167IPR003657WRKY domain
PfamPF031065.3E-22104165IPR003657WRKY domain
PROSITE profilePS5081119.313104163IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    Send to blast
MAALVSPAAR VSELMAQGRK SAAALEALLQ VQDDHAGIRE LAAEILCCCD RALAALQGKP  60
GRKKRKLGLH GAATQTTRPK RRTRTSSGET AATPTRVERK QNWDDGFVWT KYGQKGIRGS  120
DHPRHYFRCA YTLDAGGCPA RRQVQRSEEH DPPLYVLTYF ADHTCCHRTE AISALDDVKI  180
LDFGSGGSRS PRPDDGDARS GKTSRSEELP VEVAKVESTP LSDLRRVGKV AELSSSADIH  240
GSSSSSSAAW DPSASVSSDW DFFGDCSFDY VSEFFDVDDI TLYR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A9e-15101165668OsWRKY45
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020195143.11e-152probable WRKY transcription factor 62
TrEMBLM7ZG870.0M7ZG87_TRIUA; Putative WRKY transcription factor 62
STRINGTRIUR3_03056-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP46632667
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G01900.15e-18WRKY DNA-binding protein 62