PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_06407-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 217aa    MW: 23895.7 Da    PI: 8.3009
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_06407-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY71.51.1e-22171216246
                      --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTT CS
             WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpk 46 
                      +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +
  TRIUR3_06407-P1 171 HDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPVRKQVQRCAEDRT 216
                      7***************************99************9976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.806.9E-22157216IPR003657WRKY domain
SuperFamilySSF1182901.03E-19169215IPR003657WRKY domain
SMARTSM007749.8E-19170217IPR003657WRKY domain
PROSITE profilePS5081120.794172217IPR003657WRKY domain
PfamPF031061.4E-19172214IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    Send to blast
MDQSSFVAAG LKRKNAALGC GRELPSEAVG LGYGANDGDG ERRVVVGEMD FFETEMRKEK  60
RDKKDHAAAG AADGDLGMKP DLTIDMGLHV GGRRRNSGSE ESTVDDGVSS NDEDHREAKA  120
ELARVNEENK RLKTMLANAN TKCSSLHMQI ALMQQQQQQH RSSHGHGHAH HDGCQWRKYG  180
QKMAKGNPCP RAYYRCTMAA GCPVRKQVQR CAEDRTV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0846211e-47BT084621.2 Zea mays full-length cDNA clone ZM_BFb0146L18 mRNA, complete cds.
GenBankBT0857521e-47BT085752.2 Zea mays full-length cDNA clone ZM_BFc0057C03 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020176350.12e-85probable WRKY transcription factor 31
TrEMBLM7ZZ631e-160M7ZZ63_TRIUA; Putative WRKY transcription factor 42
STRINGTRIUR3_06407-P11e-161(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP126952734
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G04450.12e-29WRKY family protein