PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_06813-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 350aa    MW: 36587.6 Da    PI: 7.2896
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_06813-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY71.71e-22118178259
                      --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                       Dg +WrKYGqK++++s++prsYYrCt+    gC++k++v  s+ +p+  +i Y g+H+++
  TRIUR3_06813-P1 118 TDGKSWRKYGQKQINDSTNPRSYYRCTHLpdqGCKAKRHVHVSEANPSEYTIDYYGQHTCR 178
                      7999************************8888**************************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.3E-24108180IPR003657WRKY domain
SuperFamilySSF1182902.35E-22111180IPR003657WRKY domain
PROSITE profilePS5081120.621112180IPR003657WRKY domain
SMARTSM007743.1E-27117179IPR003657WRKY domain
PfamPF031068.1E-21119178IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    Send to blast
MASSGGARSP AAVVLDDLVD VRDRVAMLQT VLQESSPGAT VEAGELVEGM MAKLSSALSA  60
VLGTGDGSVA SSSSGAGGGP GRRRRRTGAA SSGPHRRSSS RGRMKSPLIK TVTATTLTDG  120
KSWRKYGQKQ INDSTNPRSY YRCTHLPDQG CKAKRHVHVS EANPSEYTID YYGQHTCRDP  180
STFPSLIVQG AADTAPPPDC ANLISFAPIN GANRAFTAST STSAFAHHLM KEPVDHHPML  240
FSQFSNYSSS PPAQEGIPSG SSSRACHERF MQYAGGQFVD ITGRSTSPLT VGSAPAEYWP  300
VVGVAGVDMD AGAGMDSFPS SPSSLGFMSG SLGGSFGNTV CDDDLFSFDS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A2e-20111178269OsWRKY45
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18186RRRRRT
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020181740.10.0WRKY transcription factor 6-like
TrEMBLM8A8S60.0M8A8S6_TRIUA; Putative WRKY transcription factor 70
STRINGTRIUR3_06813-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP125272837
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.11e-18WRKY DNA-binding protein 70