PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_06848-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family G2-like
Protein Properties Length: 396aa    MW: 44584 Da    PI: 7.2426
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_06848-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like49.59.3e-1618482555
          G2-like 25 ekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                      +AtPkt+++lm+++gLtl+h+kSHLQkYRl
  TRIUR3_06848-P1 18 AEATPKTVMRLMGIPGLTLYHLKSHLQKYRL 48
                     57****************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.0E-141149IPR009057Homeodomain-like
SuperFamilySSF466899.68E-61249IPR009057Homeodomain-like
TIGRFAMsTIGR015573.0E-91849IPR006447Myb domain, plants
PfamPF143792.0E-2295141IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 396 aa     Download sequence    Send to blast
MSDSERSLLN SYTHVYHAEA TPKTVMRLMG IPGLTLYHLK SHLQKYRLSK NLQAQVNVGT  60
NKNTIGCAIA ADGMPGTSVP AMINTNAIPQ PEKTMQIGEA LQMQIEVQRQ LNEQLEVQRH  120
LQLRIEAQGK YLQAVLEQAQ ESLGKQNSGP ANLEDAKMKI SELVSQVSNE CFGSGVTEIK  180
ESSSMHRLEP RQIQFMESST NNCLTAAGGF INEHRLHSQG MLKAYDDSSI FCRKHSPDHE  240
YQFSLNRSLS ERKMGHLQNV NEYHKAEFGS ESDMEIQQEY TTPQKNGRGS TASSASGSKE  300
RDADRLYLEE ANCKRQAVEH SGFEHPSSGK KLDLNTQNTD DGDQGYRHFD LNGFSWRPQE  360
AKKEMQTDYI LKKQTARDKR LNIPVLSIQV LGRNLI
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020181427.10.0myb-related protein 1-like isoform X1
RefseqXP_020181428.10.0myb-related protein 1-like isoform X1
TrEMBLM8AGL40.0M8AGL4_TRIUA; Myb family transcription factor APL
STRINGTRIUR3_06848-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP122793137
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18240.42e-61myb-related protein 1