PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_07421-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 253aa    MW: 27391.9 Da    PI: 8.0041
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_07421-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.53.1e-1065110454
                      HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
              HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                       h+e+ErrRR riN  +  Lr+++P       k ++Ka+ L ++v+ +++L
  TRIUR3_07421-P1  65 VHSEAERRRRVRINAHLTALRRMIPDT-----KQMDKAALLARVVDQVRHL 110
                      59************************9.....67************99999 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.99961110IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.8E-1364123IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.89E-1365135IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.4E-865110IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.62E-1066112No hitNo description
SMARTSM003531.2E-967116IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:3.30.70.2607.1E-4153195No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    Send to blast
MAAPCQSPQG GNELYDDCDP TVYGGRVLLP RQASSAPPAG PPELSTTSSS TGSGRTATEA  60
RALKVHSEAE RRRRVRINAH LTALRRMIPD TKQMDKAALL ARVVDQVRHL KRRASEAAQQ  120
TPAVPPETDE VSVEFCCTGD TDDDDSRLYI KASVSCDDRP DLVAGFIQAL HGLRLRTLRA  180
EVSSLGGRVQ HVFTLCKEEE GSAGCAGLNS LKEAVRFALA KVASSELVCG GSPFQFQSKR  240
QRILESHYSI MSI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703061e-121HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020191744.11e-156putative transcription factor bHLH107 isoform X1
TrEMBLM7YI710.0M7YI71_TRIUA; Transcription factor bHLH51
STRINGTRIUR3_07421-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP33473678
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40200.12e-35bHLH family protein