PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_09042-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YB
Protein Properties Length: 108aa    MW: 11779.5 Da    PI: 4.7585
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_09042-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB49.11.4e-15651085093
            NF-YB  50 asdkcqrekrktingddllwalatlGfedyveplkvylkkyrel 93 
                      as+k+ +ek k  ngddl+w+++tl fedyveplk++lk yrel
  TRIUR3_09042-P1  65 ASNKSVKEKCKIANGDDLIWSMGTLAFEDYVEPLKMHLKLYREL 108
                      89****************************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF471135.44E-664107IPR009072Histone-fold
Gene3DG3DSA:1.10.20.101.5E-865107IPR009072Histone-fold
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 108 aa     Download sequence    Send to blast
MGRDRQLLLI TARRGMEIRG RLSPRAVPAG VGCVLLPPVE DDEGEDEDAE AGEGGGGGGV  60
RPLWASNKSV KEKCKIANGD DLIWSMGTLA FEDYVEPLKM HLKLYREL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKM0787422e-32KM078742.1 Triticum aestivum CCAAT-binding transcription factor A (NFYB-D11) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLM8A5F12e-71M8A5F1_TRIUA; Nuclear transcription factor Y subunit B-4
STRINGTRIUR3_09042-P13e-72(Triticum urartu)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38880.31e-15nuclear factor Y, subunit B1