PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_09462-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 602aa    MW: 65805.9 Da    PI: 7.3557
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_09462-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY103.21.4e-32278334259
                      --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                      +DgynWrKYGqK+vk+se+prsYY+Ct+++Cpvkkkvers+ d++++ei+Y+++Hnh+
  TRIUR3_09462-P1 278 EDGYNWRKYGQKQVKSSEHPRSYYKCTHPDCPVKKKVERSQ-DGQITEIVYKSSHNHP 334
                      8****************************************.***************7 PP
2WRKY361.4e-11490512123
                      ---SS-EEEEEEE--TT-SS-EE CS
             WRKY   1 ldDgynWrKYGqKevkgsefprs 23 
                      ldDgy+WrKYGqK+vkg+++pr 
  TRIUR3_09462-P1 490 LDDGYRWRKYGQKVVKGNPNPRE 512
                      59*******************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.6E-29268336IPR003657WRKY domain
PROSITE profilePS5081123.319272336IPR003657WRKY domain
SuperFamilySSF1182903.79E-26272336IPR003657WRKY domain
SMARTSM007747.0E-36277335IPR003657WRKY domain
PfamPF031064.3E-25278334IPR003657WRKY domain
Gene3DG3DSA:2.20.25.804.7E-14475512IPR003657WRKY domain
SuperFamilySSF1182902.22E-9482511IPR003657WRKY domain
PROSITE profilePS5081115.927485553IPR003657WRKY domain
SMARTSM007743.1E-5490538IPR003657WRKY domain
PfamPF031063.6E-7491512IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 602 aa     Download sequence    Send to blast
MAGTSDRGSL MEDWMAMPPT PSPRTLMSSF LNEDFGSGQF SNFFGEHVSN KPHDQSEKRG  60
ELVGFREQLP TQSATDTATP QKDFSLQPNS FNANQKSNPQ GSLAERRASR AGFSIPKIDT  120
SRVGSSTVIR SPIAIPPGLS PTTLLESPVF LYNAMAQPSP TTGKLFVVPE ANSTMPPDST  180
FSNDVFSFQP HSGPASYSNM EKGYNVCHQN QSLSNIHQQG SSLQSSFTAA KDSADETIVK  240
PKTSDSVFSD NHSSEEQEDD EGDQNEEYSS ATNSNPAEDG YNWRKYGQKQ VKSSEHPRSY  300
YKCTHPDCPV KKKVERSQDG QITEIVYKSS HNHPLPPPNR RSGIPLSQIN DQQVHVLEKP  360
GSHAGLNTAS LWENGKSECI QDMQGVEGRP AAGPPVSAYG DTSIMESQDA ADVSSTLSNE  420
IDRATQGTIS LDCDVGEDET ESKRRKLDAL AAVTIPTATT TSSIDMVAAA SRAVREPRVV  480
VQTTSEVDIL DDGYRWRKYG QKVVKGNPNP RESTTMKFQQ PEIAGTRAPV PAVPQHPRRR  540
LISRTAGKNK RKAAILSLVA RLPLVPSASR REAIWGRQAT STSGWPLQAC RCRRCPPLVT  600
RQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A6e-172773371475WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3621580.0AK362158.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2002O24.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020200291.10.0probable WRKY transcription factor 2
TrEMBLM7YNS10.0M7YNS1_TRIUA; Putative WRKY transcription factor 2
STRINGTRIUR3_09462-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP207538100
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56270.16e-90WRKY DNA-binding protein 2