PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_09883-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 527aa    MW: 58263.2 Da    PI: 6.3053
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_09883-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY85.16.5e-27258313259
                      --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                      dDgynWrKYGqK vkg ++p+sYY+Ct  +Cpv+k+ve+sa d+++++i+Y+g+H he
  TRIUR3_09883-P1 258 DDGYNWRKYGQKAVKGGKYPKSYYKCTL-NCPVRKNVEHSA-DGRIIKIIYRGQHCHE 313
                      8*************************97.7***********.***************7 PP
2WRKY1023.5e-32421479159
                      ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                      ldDgy+WrKYGqK+v+g+++prsYY+Ct++gC vkk++ers+e+p++v++tYeg+H+h+
  TRIUR3_09883-P1 421 LDDGYRWRKYGQKVVRGNPHPRSYYKCTYQGCDVKKHIERSSEEPHAVITTYEGKHTHD 479
                      59********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.7E-24254315IPR003657WRKY domain
SuperFamilySSF1182902.48E-21255315IPR003657WRKY domain
SMARTSM007741.1E-28257314IPR003657WRKY domain
PROSITE profilePS5081120.885258315IPR003657WRKY domain
PfamPF031063.6E-21258312IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.3E-34408481IPR003657WRKY domain
SuperFamilySSF1182907.59E-29414481IPR003657WRKY domain
PROSITE profilePS5081135.645416481IPR003657WRKY domain
SMARTSM007746.3E-38421480IPR003657WRKY domain
PfamPF031067.2E-25422479IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 527 aa     Download sequence    Send to blast
MVEWLGGQWY PQPTRFQVLD LAPVLAFFWD YFRPSGDVRL VGGDVFINYK GVCGDFINVK  60
MMSRRGLSKI CDPSRFEMVA LSLDLSNGGT IFFHFESVTE PDFTIALCFV ELLYMVLVTI  120
AMDNFDVFHE QDLAQLAAQV SQKKELREKQ GAGLHHKIGP QLAFSKYSIL DQVDNSSSFS  180
LATSVLTPQH VSSSVGAASM QGQTLPSHTG SGSVNTGPTG VLQVLQDSST TLDSINTGSA  240
GVLEALQGSS ITLDKPADDG YNWRKYGQKA VKGGKYPKSY YKCTLNCPVR KNVEHSADGR  300
IIKIIYRGQH CHEPPSKRFK DCGDLLNELD EFNDAKDPST RSQLGCQGYY GKPITPNGTM  360
VDGLLPTKEE GDEQLSSLSD IREGDGEIRT VDGDVGDADA NERNAPGQKI IVSTTSDVDL  420
LDDGYRWRKY GQKVVRGNPH PRSYYKCTYQ GCDVKKHIER SSEEPHAVIT TYEGKHTHDV  480
PESRNRSQGT GQHHCKEQTY SEQPAASFCS SSEKRKYGTA ILNDLAF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A3e-33258481878Probable WRKY transcription factor 4
2lex_A3e-33258481878Probable WRKY transcription factor 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU6654300.0EU665430.1 Triticum aestivum WRKY19 transcription factor mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020146250.10.0probable WRKY transcription factor 3
TrEMBLM7ZD480.0M7ZD48_TRIUA; Putative WRKY transcription factor 3
STRINGTRIUR3_09883-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP134538122
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03340.15e-70WRKY DNA-binding protein 3