PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_09891-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C2H2
Protein Properties Length: 132aa    MW: 14441.2 Da    PI: 8.8921
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_09891-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.30.000252949323
                     ETTTTEEESSHHHHHHHHHHT CS
          zf-C2H2  3 CpdCgksFsrksnLkrHirtH 23
                     C +Cg+sF ++  +  H++ H
  TRIUR3_09891-P1 29 CVYCGRSFYNSQAFGGHQNAH 49
                     *************99999988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576676.77E-71668No hitNo description
PROSITE profilePS5015711.1982754IPR007087Zinc finger, C2H2
PROSITE patternPS0002802949IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 132 aa     Download sequence    Send to blast
AMEAKEDQCE LTLHSSPSSV REPPGLFLCV YCGRSFYNSQ AFGGHQNAHK EERRLARRRR  60
EMAAARRVHA ASLSSSAPSS HVAATAMLSA EDHAAGPAAK KTRMEIQLER GRSFPEYDGA  120
RTGDGLDLSL RL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15259RRLARRRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020162034.15e-68uncharacterized protein LOC109747369
TrEMBLT1LXS46e-91T1LXS4_TRIUA; Uncharacterized protein
STRINGTRIUR3_09891-P11e-91(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP18336274
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57520.11e-06zinc finger protein 2