PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_10262-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 233aa    MW: 24663.4 Da    PI: 9.0805
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_10262-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY105.33.2e-33126184159
                      ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                      ldDgy+WrKYGqK+vkg++ prsYY+Ct ++C+v+k++er+++dp++v +tY+g+Hnh+
  TRIUR3_10262-P1 126 LDDGYRWRKYGQKVVKGNPRPRSYYKCTAENCNVRKQIERASTDPRCVLTTYTGRHNHD 184
                      59********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.805.7E-34111186IPR003657WRKY domain
SuperFamilySSF1182901.44E-28119186IPR003657WRKY domain
PROSITE profilePS5081135.588121186IPR003657WRKY domain
SMARTSM007748.1E-36126185IPR003657WRKY domain
PfamPF031068.8E-25127184IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    Send to blast
MADRRGDGMR QQPPYSSGHQ ERVFDGGGGG GGPAFGNDYD PGSSYMSLLG SGVNPQQSLP  60
AQQAWGVDDV APPTINLTPH FSMSMELNGR VAGTFVLISG AGGPAGQRVV KKHKIILQTP  120
SEVDLLDDGY RWRKYGQKVV KGNPRPRSYY KCTAENCNVR KQIERASTDP RCVLTTYTGR  180
HNHDPPGKGA GAAAAAGAGG GSSSDPVPSI VNPSGNTLHQ PSGIHQLKEE NRD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A6e-35117187878Probable WRKY transcription factor 4
2lex_A6e-35117187878Probable WRKY transcription factor 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3638030.0AK363803.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, partial cds, clone: NIASHv2019A07.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020197516.11e-75probable WRKY transcription factor 58
TrEMBLM7ZJS11e-171M7ZJS1_TRIUA; Putative WRKY transcription factor 4
STRINGTRIUR3_10262-P11e-172(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP28753236
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13960.12e-38WRKY DNA-binding protein 4