PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIUR3_10995-P1

Organism

Triticum urartu

Taxonomic ID

4572

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

WRKY

Protein Properties

Length: 208aa MW: 22415.7 Da PI: 6.5996

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIUR3_10995-P1	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	42.5	1.3e-13	160	198	1	37
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEE CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkk 37 ldDgy+WrKYGqK vk+s fpr YY t++ C kkk TRIUR3_10995-P1 160 LDDGYRWRKYGQKAVKNSSFPR-YYLLTFTpmrMCFEKKK 198 59********************.55555554678888886 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:2.20.25.80	5.4E-14	147	198	IPR003657	WRKY domain
SuperFamily	SSF118290	7.85E-11	153	184	IPR003657	WRKY domain
PROSITE profile	PS50811	13.896	155	197	IPR003657	WRKY domain
SMART	SM00774	5.3E-6	160	208	IPR003657	WRKY domain
Pfam	PF03106	4.9E-9	161	184	IPR003657	WRKY domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 208 aa Download sequence Send to blast
MSGSAAAGGE DLGGGQFYGD HPPADDGFFQ SRSACGGEGD GGVTPSVYSS ITDYLQGLLD 60 PAELARHLDA PPCYPAMRDV IGETATPVTP NSSTSGEAAG AESHGCKRGS PVPEEGDEDG 120 SADHHNHRSD EKEQKKKGKG EKKARGSRVA FATKSEVDHL DDGYRWRKYG QKAVKNSSFP 180 RYYLLTFTPM RMCFEKKKHA FHFSVLLL

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	KR827397	0.0	KR827397.1 Triticum aestivum WRKY46 transcriptional factor mRNA, partial cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020180590.1	1e-102	probable WRKY transcription factor 71 isoform X2
TrEMBL	A0A446JDY1	1e-152	A0A446JDY1_TRITD; Uncharacterized protein
TrEMBL	M7YUF2	1e-152	M7YUF2_TRIUA; Putative WRKY transcription factor 23
STRING	TRIUR3_10995-P1	1e-153	(Triticum urartu)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP623	37	173

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47260.1	5e-17	WRKY DNA-binding protein 23