PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_11154-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 245aa    MW: 26854.5 Da    PI: 4.7493
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_11154-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM32.62.3e-101111135128
              NAM  35 kevdiykvePwdLp.kkvka..eekew.yfFskrdkkyatgk......rknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgek 118
                      ++vd+y + P+ Lp ++++   + k w +fF++r   +a+g          r++  g W    ++k+  +++g + g +  ++f+    ++g+ 
  TRIUR3_11154-P1  11 EDVDVYGTRPEALPfHRCNRgaSGKVWgHFFTTRPAGAASGVasggpgSYVRVVPGGLWVRYDEEKAYADADGDVLGYRCRFAFH---GEDGKL 101
                      789***********65444422566889******999997665555667789999*****************************9...567789 PP

              NAM 119 tdWvmheyrl 128
                      t W m+e+rl
  TRIUR3_11154-P1 102 TAWRMKEFRL 111
                      ********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100512.1611138IPR003441NAC domain
SuperFamilySSF1019414.84E-1111136IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    Send to blast
MTKGTTGVPP EDVDVYGTRP EALPFHRCNR GASGKVWGHF FTTRPAGAAS GVASGGPGSY  60
VRVVPGGLWV RYDEEKAYAD ADGDVLGYRC RFAFHGEDGK LTAWRMKEFR LNEGAAAYRG  120
VAFHPVAKNL VAWKVYNDVE EPLSDDEGDD EDEDEDDEAE EMEVDDPVAA AACTEDDLTQ  180
RQDKKKKQKL RGCVVRKVFT KPAVPPPSAR SSDDGSAGSS SRYRSADEEA GYPGEEQARK  240
RARWV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020172477.12e-91NAC transcription factor NAM-1-like
TrEMBLM7YKI61e-178M7YKI6_TRIUA; Uncharacterized protein
STRINGTRIUR3_11154-P11e-178(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP128912231