PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_11581-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 259aa    MW: 27746.9 Da    PI: 7.8659
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_11581-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM43.11.4e-1331403128
              NAM   3 pGfrFhPtdeelvveyLkkkvegkk..leleevikevdiykvePwdLpkkvkaeek.ewyfFskrdkkyatgkrknratksgyWk.atgkdkev 92 
                      + f+F+Ptd ++v  yL +++ g +  +   +++ + d +++ PwdL +k++++++ + +fF + ++  +  kr       g+W+ + g+  +v
  TRIUR3_11581-P1   3 AAFKFDPTDADIVASYLLPRAVGLDepHGHGRAVIDDDPMSLPPWDLMEKHNHGTShQAFFFGPPRNGGP-VKRVVPGKGGGTWQgQNGSVGTV 95 
                      67****************9998887443333457788**********86655555526688877766443.34444446799***667777777 PP

              NAM  93 lsk..........kgel...vglkktLvfykgrapkgektdWvmheyrl 128
                      +            +  +      +  L++   ra +   + Wvm ey++
  TRIUR3_11581-P1  96 TLFcdgdgdgartG--EvdiSYRRYDLTYK--RAGDKAPSGWVMSEYQI 140
                      76676776655442..14534556667776..56666689*******86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100520.2451156IPR003441NAC domain
SuperFamilySSF1019419.42E-193145IPR003441NAC domain
PfamPF023654.2E-114140IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    Send to blast
MAAAFKFDPT DADIVASYLL PRAVGLDEPH GHGRAVIDDD PMSLPPWDLM EKHNHGTSHQ  60
AFFFGPPRNG GPVKRVVPGK GGGTWQGQNG SVGTVTLFCD GDGDGARTGE VDISYRRYDL  120
TYKRAGDKAP SGWVMSEYQI TSPPLLSTVL THIGLTVAAR EQRKRQPADP EPFAQHGPDK  180
VLAVAAAAAA AAEHQRVSPP PVQSGPDAQA DDGALYHGGT SVTGVGENGG HYNVPLLLNG  240
QEYYKDKSRV KRKRRRYGA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1250255KRKRRR
2251255RKRRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020172436.11e-147uncharacterized protein LOC109757996
TrEMBLM7YT570.0M7YT57_TRIUA; Uncharacterized protein
STRINGTRIUR3_11581-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP143011926