PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_11963-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family G2-like
Protein Properties Length: 250aa    MW: 27394.6 Da    PI: 4.75
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_11963-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like51.62e-16741032655
          G2-like  26 kAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                      +AtPk il+lm+ +gLt++h+kSHLQkYR+
  TRIUR3_11963-P1  74 RATPKGILKLMNSDGLTIYHIKSHLQKYRM 103
                      8****************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.2E-1472104IPR009057Homeodomain-like
SuperFamilySSF466892.51E-674103IPR009057Homeodomain-like
TIGRFAMsTIGR015572.9E-1174104IPR006447Myb domain, plants
PfamPF143791.8E-22156202IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    Send to blast
MVIDVPSEIS EGPVDGGAEQ QQLAEPDGEP PVRQEQSRRA SDPHRHRQRV STSGAEQDAD  60
PVDAGAARAV RGLRATPKGI LKLMNSDGLT IYHIKSHLQK YRMAKYMPAP SSSSSSSEGT  120
TTILDLPITS PFSSFVAIGL HACILPGSDT CAHRGMHITE ALRVQLDVQR RLHEQLEIQR  180
KLQVRIEEQG KRLQKMFEDQ LKVSGNTAPA AAETPSEQEE DTMFVDVIDD DDEVQIISVT  240
SGSYDDDLAL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3643325e-75AK364332.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2023N07.
GenBankAK3709625e-75AK370962.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, partial cds, clone: NIASHv2121B01.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020165250.12e-64uncharacterized protein LOC109750710 isoform X1
TrEMBLM8AYK20.0M8AYK2_TRIUA; Myb family transcription factor APL
STRINGTRIUR3_11963-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP69333751
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28610.16e-33phosphate starvation response 1