PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_12166-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C2H2
Protein Properties Length: 111aa    MW: 11990.7 Da    PI: 10.4883
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_12166-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.90.000166991123
                     EEETTTTEEESSHHHHHHHHHHT CS
          zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                     ++C+ Cg  F     L  H+r+H
  TRIUR3_12166-P1 69 HQCHVCGLEFEMGQALGGHMRRH 91
                     79********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF139126.7E-111741IPR007087Zinc finger, C2H2
SuperFamilySSF576673.17E-71791No hitNo description
SMARTSM003550.511739IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.1821739IPR007087Zinc finger, C2H2
PROSITE patternPS0002801939IPR007087Zinc finger, C2H2
PfamPF139123.0E-116894IPR007087Zinc finger, C2H2
PROSITE profilePS501579.6816996IPR007087Zinc finger, C2H2
SMARTSM003550.246991IPR015880Zinc finger, C2H2-like
PROSITE patternPS0002807191IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 111 aa     Download sequence    Send to blast
MADRTKKQRR GVAAGEFVCK TCSRAFPSFQ ALGGHRTSHL RGHNGLALGL AAGSDQPGTK  60
KTTDQKQAHQ CHVCGLEFEM GQALGGHMRR HREQEAATTA QAPPVLLQLF V
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in stress responses. {ECO:0000250}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By heat stress. {ECO:0000269|PubMed:18201973}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU2535541e-123EU253554.1 Triticum aestivum C2H2 zinc finger protein (ZFP2) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020198422.15e-66zinc finger protein ZAT8-like
RefseqXP_020199617.15e-66zinc finger protein ZAT8-like
SwissprotQ9LX855e-20ZAT8_ARATH; Zinc finger protein ZAT8
TrEMBLA0A3B6KSK74e-75A0A3B6KSK7_WHEAT; Uncharacterized protein
TrEMBLA0A446TLC34e-75A0A446TLC3_TRITD; Uncharacterized protein
STRINGTRIUR3_12166-P19e-76(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP130530117
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46090.15e-22C2H2 family protein