PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_12167-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C2H2
Protein Properties Length: 118aa    MW: 12815.5 Da    PI: 11.3052
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_12167-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.90.000325981123
                     EEETTTTEEESSHHHHHHHHHHT CS
          zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                     ++C+ Cg++F +   L  H  +H
  TRIUR3_12167-P1 59 FVCKTCGRVFETFQALGGHRTSH 81
                     89**********99998888877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576671.81E-55583No hitNo description
PfamPF139121.4E-105981IPR007087Zinc finger, C2H2
PROSITE profilePS501579.8065986IPR007087Zinc finger, C2H2
PROSITE patternPS0002806181IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 118 aa     Download sequence    Send to blast
MGAGMKRARE EPVVSLALSL STESSTTSTA TSDNSTGAPA TRKRVRRGRV VVASGQREFV  60
CKTCGRVFET FQALGGHRTS HLCGRHGLEL GVAVARAIRE QQRREDKQQH DCHIRGLG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020198423.11e-49zinc finger protein ZAT8-like
RefseqXP_020199616.11e-49zinc finger protein ZAT8-like, partial
TrEMBLT1M3W98e-79T1M3W9_TRIUA; Uncharacterized protein
STRINGTRIUR3_12167-P11e-79(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP130530117
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61470.13e-07C2H2-like zinc finger protein