PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_12324-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C2H2
Protein Properties Length: 110aa    MW: 12173.8 Da    PI: 9.326
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_12324-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2130.00032848323
                     ETTTTEEESSHHHHHHHHHHT CS
          zf-C2H2  3 CpdCgksFsrksnLkrHirtH 23
                     C +C + F+++  L  H++ H
  TRIUR3_12324-P1 28 CVYCRRKFRSSQALGGHQNAH 48
                     ******************988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576674.73E-72063No hitNo description
PROSITE profilePS5015710.8662653IPR007087Zinc finger, C2H2
PROSITE patternPS0002802848IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0016021Cellular Componentintegral component of membrane
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 110 aa     Download sequence    Send to blast
MEHAQDELSL ELTLATAVVA PAPGFFLCVY CRRKFRSSQA LGGHQNAHKQ ERAAKRLRET  60
AVATTHAWNP GRAAGAVWVS EESAAAGGMA YKRSRISWER DHELDLSLRL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020152485.11e-58uncharacterized protein LOC109737768
TrEMBLA0A3B6RST37e-75A0A3B6RST3_WHEAT; Uncharacterized protein
TrEMBLM7ZAG37e-75M7ZAG3_TRIUA; Zinc finger protein 7
STRINGTRIUR3_12324-P11e-75(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP18336274
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14010.13e-12C2H2 family protein