PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_12419-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family EIL
Protein Properties Length: 346aa    MW: 38766.7 Da    PI: 7.0162
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_12419-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3108.21.6e-3359155297
                      XXXXXXXXXXXXXXXXXXXXXX..XXXXX..XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
             EIN3   2 elkkrmwkdqmllkrlkerkkqlledkeaa.tgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraW 94 
                      +lkkrmwkdqm+l++l++    + ++  +  ++ ++++ ++ + rrk+m raQDg+L++M+k+m+ cna+GfvYg i+e g+p +g+sdsLr+W
  TRIUR3_12419-P1  59 DLKKRMWKDQMRLMKLEGHAGVRSGAPARRqLEDQEEDGPEARCRRKAMLRAQDGVLRHMMKMMQSCNARGFVYGVIDEAGEPTSGSSDSLRGW 152
                      89**************9999876655444349999999******************************************************88 PP

                      XXX CS
             EIN3  95 Wke 97 
                        e
  TRIUR3_12419-P1 153 GEE 155
                      555 PP
2EIN3101.12.2e-31160232191263
                      -.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX CS
             EIN3 191 gtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah 263
                      g+ppy+kphdlkkawkvs+L+avikhmsp+++++r+l++qsk+lq++msakes+++++vl+qee++  +++++
  TRIUR3_12419-P1 160 GAPPYRKPHDLKKAWKVSLLSAVIKHMSPRFDQMRRLVWQSKRLQQRMSAKESDTWSKVLRQEEALSGRLKSS 232
                      58**************************************************************998887766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048738.1E-3459155No hitNo description
Gene3DG3DSA:1.10.3180.102.7E-34105231IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167681.83E-29106225IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
PfamPF048731.9E-26160223No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    Send to blast
MDQGTHSRWR SPFPGSPMER VDAHGGGLKA LEVDVERQEE IIDFEAEPPG SSESVEILDL  60
KKRMWKDQMR LMKLEGHAGV RSGAPARRQL EDQEEDGPEA RCRRKAMLRA QDGVLRHMMK  120
MMQSCNARGF VYGVIDEAGE PTSGSSDSLR GWGEEXPPRG APPYRKPHDL KKAWKVSLLS  180
AVIKHMSPRF DQMRRLVWQS KRLQQRMSAK ESDTWSKVLR QEEALSGRLK SSLRITPLDD  240
DHDGEGMPRR RAAGGRARRR PRGGSRDLAA MVPGLEAGVL AEESQGSINE LMELYYSCLQ  300
GGGAEEKHDV AMQGAPRGVD DVAQQFLMDV IGSCPEVDHV LRLMEE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A3e-2011122910130Protein ETHYLENE INSENSITIVE 3
4zds_B3e-2011122910130Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703069e-93HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015691482.16e-90PREDICTED: ETHYLENE INSENSITIVE 3-like 3 protein
SwissprotQ9LX164e-25EIL4_ARATH; Putative ETHYLENE INSENSITIVE 3-like 4 protein
TrEMBLT1M4K90.0T1M4K9_TRIUA; Uncharacterized protein
STRINGTRIUR3_12419-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP63838168
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10120.16e-27EIL family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Jeong HJ,Choi JY,Shin HY,Bae JM,Shin JS
    Seed-specific expression of seven Arabidopsis promoters.
    Gene, 2014. 553(1): p. 17-23
    [PMID:25261846]