PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_12694-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 268aa    MW: 29932.2 Da    PI: 7.795
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_12694-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding271e-08216264146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqk 46 
                      r++WT+  +  l+++v ++G+g+Wk I    +   + R+  + k+++++
  TRIUR3_12694-P1 216 RKKWTEIQERTLIEGVDKYGKGNWKDIKIAYPdvfQDRSTVDMKDKFRN 264
                      789*******************************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129410.749211268IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.3E-9214265IPR009057Homeodomain-like
SuperFamilySSF466892.39E-12214265IPR009057Homeodomain-like
SMARTSM007171.3E-4215268IPR001005SANT/Myb domain
PfamPF002491.9E-7216264IPR001005SANT/Myb domain
CDDcd116601.54E-17217265No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    Send to blast
MSQRRLVDAE WESLPPSELE LEADRIAGAG ALDTWANADQ DTRKKLRRLV GESTAREILG  60
KLGQDPSKAP QVDEAANAPS TSGANEGDRA QQDDEAHLGR GKGEASLAQE DCARHQQEPV  120
ERTTDARIPE KPVTSAATKG KEQATSSHVT GQAAPDHNKS HPVTGPKPSL MERKPSAIVY  180
QWDSGDSDSE RPPHQRRLPN YERRMRPPPA VPYKTRKKWT EIQERTLIEG VDKYGKGNWK  240
DIKIAYPDVF QDRSTVDMKD KFRNMGRH
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020158353.11e-172uncharacterized protein LOC109743674
TrEMBLM8AB050.0M8AB05_TRIUA; Uncharacterized protein
STRINGTRIUR3_12694-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP139982224
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15720.19e-11TRF-like 5