PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_12995-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 72aa    MW: 7567.75 Da    PI: 11.3969
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_12995-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA29.11.3e-092342120
             GATA  1 CsnCgttkTplWRrgpdgnk 20
                     C+ C+ttkTplWR gp+g+ 
  TRIUR3_12995-P1 23 CTACNTTKTPLWRGGPSGPM 42
                     ******************85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF577162.47E-61641No hitNo description
SMARTSM004012.5E-41760IPR000679Zinc finger, GATA-type
PROSITE profilePS501149.1961740IPR000679Zinc finger, GATA-type
Gene3DG3DSA:3.30.50.101.1E-62140IPR013088Zinc finger, NHR/GATA-type
PfamPF003207.1E-72342IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 72 aa     Download sequence    Send to blast
MAEGSGSLDP GERPAAGSQP KACTACNTTK TPLWRGGPSG PMRRRMRRRP RPGAEEKAAI  60
LLMALSSGVI YG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14348RRMRRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3709092e-47AK370909.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2120C01.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020169086.11e-20GATA transcription factor 15-like
TrEMBLM7YJV53e-43M7YJV5_TRIUA; Uncharacterized protein
STRINGTRIUR3_12995-P15e-44(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP24183892