PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_13053-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 296aa    MW: 32497.5 Da    PI: 5.8777
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_13053-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.74.4e-13119168355
                      HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
              HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +h+ +Er RR++iN+++  L++l+P +   ++k   Ka++L + ++Y++sLq
  TRIUR3_13053-P1 119 NNHSLAERFRREKINERMKHLQDLVPGC---NKKITGKAMMLDEIINYVQSLQ 168
                      58**************************...8888*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.64E-12114172No hitNo description
SuperFamilySSF474592.36E-18115184IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.897116167IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.6E-10119168IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.4E-18120185IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.0E-11122173IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    Send to blast
MDFDEHVLFP MHNAGMQDGV QFYNPTAGIF LLLASPVEAE QGGSGTELSR NMSMEKGLKG  60
GKRKGSGEGS STMHSQQEET GGMSQREVSM ERAGEKEGDA ASNREDYVHI RAKRGQATNN  120
HSLAERFRRE KINERMKHLQ DLVPGCNKKI TGKAMMLDEI INYVQSLQRQ VEFLSMKLSA  180
VSPELNCDLD LQDILCPQDA RSAFPGYGQR LGSVHPNSNM YRASQPGLSR PELYGNGIII  240
PNPANVHMAR AAQQLSAFPQ RSIVWDEELG NVGPAAFPSD VVGASSLENS ESMKVE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020159228.10.0transcription factor bHLH137-like isoform X1
TrEMBLA0A446QPC90.0A0A446QPC9_TRITD; Uncharacterized protein
TrEMBLM7Z1X00.0M7Z1X0_TRIUA; Transcription factor bHLH62
STRINGTRIUR3_13053-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP45362933
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.11e-42bHLH family protein